Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0105 ATGAAATTGAAGCAAGAGCACTGTGGCACGTCGCAACAAAGATTTCCTGTGTGGTTGAAGTATGTTCCTGGCATCAGCTTCACAACAGACAATGTGCCTTTCAAGGCGGCAATGCGTGGCTTCACCCAGAAAATTGTCCAGATGATGAAAACTGAAAAGTTATATCAATCTCAGGGGGTTCCAATCATTCTTTCTCAGGTGCACAGAATTTGGTGGCCCCAATCATCAGTGACCAGTCCAAGATCTAGCATTTGCAGTTGCTCGATTCATACAAAAGAGTGGCTCATTTGTCAATTATTACATGGGTTAATCAGGGAACCTAAATATAGTCATTTGAAGGAGCTTCACAAAGCTATCAAACAATGTGAACCTGCTCTGGTGTCTTCTGATCCTATTATTACATCACTAGGAACGTATCAGCAGGCTCATGTATTCTCTTCAGGAACCGGAGCATGTTCAGCTTTTCTGGCAAACTATCACACGAAGTCTTCTGCTAGAGTTACATTTAAAAACAATCACTATGATTTGCCTCCTTGGTCCATAAGCATTCTCCCTGATTGCAGAAACGTCGTATTTAACACGGCAAATGTGAGAGTTCAAACATCTCAAGCTCAAATGTTGCCAACGAATTCGAAGTTGTTCTCATGGGAGACCTACGATGAAGATCTATCTTCTCTGGATGAAACTTCAGGGGTTACAGCAGCTGGACTCTTGGAACAAATAAACGTTACCAGAGATACTAGCGACTATGACGGAAAAGGTGTATGCCTTCTGAGCCTTCATAAACTTAATCGTTTTCCTGGTTTGTTTATATGGCACAGTGTGGATATTAGCTCATCGGAATCATTTCTTCGAGGAGGACAGAAACCCAGTATCATCGTACAGTCGTCAGGCCATGCCGTGCATGTGTTCGTTAATGGGCAATTTTCAGGTGGATTGTTAGTCACTGATTGCTTCCCTTTTTCTGTTTCTGTCCCTGTTGGAATTAAGAATGGAGGCCTTCATTTTGAAACATGGAAGACAGGGATCAACGGTCCAATTGGGCTTAAAGGAGAGGCTATGAATCTGGTATCTCCTGATGGGGTCTCATCTGTTGATTGGGTGCAAGAGTCAATAGCTGCCCAAAGCCAGCAACAACTCAAATGGCATAAGGCTTATTTTGACGCGCCTGGAGGAGATGAAGCATCGGCCTTGGACATGGGCAGCATGGGAAAGGGTCAAGTGTGGATCAACGGTGAGAGCATAGGAAGGTATTGGTTGGCTTATGCAAATGGTGACTGCAACTCTTGCTCTTATTCTGGCCCCTTCCGGCCTGATAACTGCCAACTTGGTTGTGGAAAACCCACCCAACGATGATGGCTAAATCTACGAGATCGCTTTGAGTTTTATTCTTGTAAGAATGAAGAGCATTTGATAGAGCTGCCTTCTCTAGGAGTTTTACTTTCAATTAACGTGGTTAAGAAGATATCGAAATCATGCAAATTCACAAGGACTCGGACTCAACTTATAAGTGATTGAACATGGGCTGGGTCGTCGAGCCACGCGATTTTGAAAAATATTTGTACGGATAATCCAAAACCAGAAATTGGATTCATTGAGATATCAGTGGAAAATCACAGTCTCCGGACGCAGTTGAGAGTAATCACCACAATAACAGCCTCATGTCTTCCGCATAATCTTTTCTTCTTTCTTCACGCCATAAAGAATCAAACCCGTAAACGCCTTCTCTCTTTACTTGGGATGACGCAAATGGCATTCCCCCAACTCATCCCCTCTGCTTCCTCTTCCTCGTCCTTGAACCCCAATAAACTCCCCTACTCTTCCAATCCTAATCTTCATTTCCCTTCACAGCCCCTTCTTCGCTGCCGCCTCCCCCACTTCCTTCGCCGCCGGAGCCATCATGCCCTCCGGTGCTCCGCCTCATCTTTCTCCGAGAAGCACCACACCAACTCCCCCAAATCAGACGACCTAGTCGAACTCCCTCTTTTCCCTCTTCCCCTCGTCCTCTTCCCCGGCGCTATCCTCCCTTTGCAGATCTTTGAGTTCCGCTACCGCATAATGATGCACACTCTCCTTCAGACCGATCTCCGTTTCGGGGTTATCTACTCCGATGCTCTTTCCGGCACGGCCGATGTTGGCTGCGTCGGTGAAGTCATTAAGCACGAGCGTCTCGTCGATGACCGTTTCTTTTTAATCTGTAAAGGCCAAGAGCGGTTCCGCGTCACCAACCTTGTCCGCACCAAGCCCTACCTGGTAGCTCAAGTGACTTGGCTCGAGGATAGGCCGTCTGCGAATGGTGAAGAGGACCTTGACGGTTTGGCCAATGAGGTGGAGACCTATATGAAGGATGTCATACGGATATCCAATCGTTTGGGGGGAAAACCGGAGAAGGAAGTGGGGGATTTGAGAAGGAACCTCTTTCCCACGCCTTTTTCTTTCTTTGTTGGCAGCACATTCGAGGGCGCGCCTAGAGAGCAGCAAGCCTTGCTTGAATTGGAGGATACTGCCACAAGATTGAAGAGGGAGAAGGAAACTTTAAGAAACACGCTTAATTACTTGACTGCTGCCTCAGCTGTTAAAGACGTCTTTCCTTCTTCTTAG 2601 0.4637 MKLKQEHCGTSQQRFPVWLKYVPGISFTTDNVPFKAAMRGFTQKIVQMMKTEKLYQSQGVPIILSQVHRIWWPQSSVTSPRSSICSCSIHTKEWLICQLLHGLIREPKYSHLKELHKAIKQCEPALVSSDPIITSLGTYQQAHVFSSGTGACSAFLANYHTKSSARVTFKNNHYDLPPWSISILPDCRNVVFNTANVRVQTSQAQMLPTNSKLFSWETYDEDLSSLDETSGVTAAGLLEQINVTRDTSDYDGKGVCLLSLHKLNRFPGLFIWHSVDISSSESFLRGGQKPSIIVQSSGHAVHVFVNGQFSGGLLVTDCFPFSVSVPVGIKNGGLHFETWKTGINGPIGLKGEAMNLVSPDGVSSVDWVQESIAAQSQQQLKWHKAYFDAPGGDEASALDMGSMGKGQVWINGESIGRYWLAYANGDCNSCSYSGPFRPDNCQLGCGKPTQRXWLNLRDRFEFYSCKNEEHLIELPSLGVLLSINVVKKISKSCKFTRTRTQLISDXTWAGSSSHAILKNICTDNPKPEIGFIEISVENHSLRTQLRVITTITASCLPHNLFFFLHAIKNQTRKRLLSLLGMTQMAFPQLIPSASSSSSLNPNKLPYSSNPNLHFPSQPLLRCRLPHFLRRRSHHALRCSASSFSEKHHTNSPKSDDLVELPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLQTDLRFGVIYSDALSGTADVGCVGEVIKHERLVDDRFFLICKGQERFRVTNLVRTKPYLVAQVTWLEDRPSANGEEDLDGLANEVETYMKDVIRISNRLGGKPEKEVGDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTATRLKREKETLRNTLNYLTAASAVKDVFPSS 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0105 866 PANTHER BETA-GALACTOSIDASE RELATED 15 67 IPR001944 GO:0004553|GO:0005975
Lele25g0105 866 Pfam Beta-sandwich domain in beta galactosidase 126 197 IPR041392 -
Lele25g0105 866 SMART lon_5 659 848 IPR003111 -
Lele25g0105 866 SUPERFAMILY Galactose-binding domain-like 348 422 IPR008979 -
Lele25g0105 866 PRINTS Glycosyl hydrolase family 35 signature 378 392 IPR001944 GO:0004553|GO:0005975
Lele25g0105 866 PRINTS Glycosyl hydrolase family 35 signature 57 72 IPR001944 GO:0004553|GO:0005975
Lele25g0105 866 PRINTS Glycosyl hydrolase family 35 signature 405 421 IPR001944 GO:0004553|GO:0005975
Lele25g0105 866 Gene3D - 641 758 IPR046336 -
Lele25g0105 866 Pfam ATP-dependent protease La (LON) substrate-binding domain 659 846 IPR003111 -
Lele25g0105 866 Coils Coil 822 856 - -
Lele25g0105 866 ProSiteProfiles Lon N-terminal domain profile. 660 848 IPR003111 -
Lele25g0105 866 SUPERFAMILY PUA domain-like 659 847 IPR015947 -
Lele25g0105 866 SUPERFAMILY Galactose-binding domain-like 181 350 IPR008979 -
Lele25g0105 866 Gene3D - 357 430 - -
Lele25g0105 866 Gene3D Glycosidases 7 72 - -
Lele25g0105 866 Pfam Glycosyl hydrolases family 35 15 68 IPR031330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0105 Lele-ChrLele25 681150 688131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0105 15 67 Glycoside Hydrolase AT4G36360 73.585 6.34e-19 90.1