Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0102 ATGCTGAAATCAGGGATGGGAATTGAGGAACGCAAGCAGGTGAAACGGCCTGCTCAGGCCAGCTCCAGAAAAGGCTGTATGAGAGGCAAAGGTGGCCCTGAGAACGCCAGCTGCACCTACAAAGGCGTCCGTCAGAGGACTTGGGGCAAATGGGTCGCCGAAATCCGCGAGCCCAACCGCGGCGCTCGTCTCTGGCTCGGCACATTTGAGACTTCCCATGAAGCCGCTTTGGCTTACGACGCCGCCGCTCGTAAGCTTTACGGATCCGAGGCCAAGCTCAATCTCCCCGACCTCTCTCTCAATTCTCACCATTCTCAGCCTCATCCGCAGCATTCCTCTGCCCCCCCTCAGATTCCTCCAATGGTGCCCAGTCACCAGCCTCTGCCAGATCATCAGCTGCTCCGCAACTCTGCTGCTAACATTCCTCCCTGCTCTTTCAACGCCATCCCCAATAATGCTCCGATGATGTCCATGGCTTCTCATCAGCAAGTTGCACCAGTGTATAGCCCTAGCTCTAGCTCTAGCTCTAGCTCCACCATGTCTGTTCCGTTCAACGCCGAGGAGAACATGATGAAGCCGATTGAGAAGGAGGAGGATTTCGGTCAATTCTGGGGGACGATGAACGAGGGCCTGCCTGTCCCTGAGTTCGATGATTCAATCTGGGCCGAAGCCGCCATGTCTCTGGATTTCCCTGTAATGTCTGATGCAAGCATATATGCGAGTGGCACTTTGGGAGATGTGGCTCCATGGGACTCTCTGCAAACTCCCTGGTGCATGTGA 780 0.5551 MLKSGMGIEERKQVKRPAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSHEAALAYDAAARKLYGSEAKLNLPDLSLNSHHSQPHPQHSSAPPQIPPMVPSHQPLPDHQLLRNSAANIPPCSFNAIPNNAPMMSMASHQQVAPVYSPSSSSSSSSTMSVPFNAEENMMKPIEKEEDFGQFWGTMNEGLPVPEFDDSIWAEAAMSLDFPVMSDASIYASGTLGDVAPWDSLQTPWCM 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0102 259 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Lele25g0102 259 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Lele25g0102 259 MobiDBLite consensus disorder prediction 97 111 - -
Lele25g0102 259 SUPERFAMILY DNA-binding domain 39 97 IPR016177 GO:0003677
Lele25g0102 259 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Lele25g0102 259 MobiDBLite consensus disorder prediction 112 126 - -
Lele25g0102 259 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Lele25g0102 259 FunFam Ethylene-responsive transcription factor 2 38 97 - -
Lele25g0102 259 MobiDBLite consensus disorder prediction 1 17 - -
Lele25g0102 259 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 13 197 - -
Lele25g0102 259 MobiDBLite consensus disorder prediction 1 38 - -
Lele25g0102 259 MobiDBLite consensus disorder prediction 97 130 - -
Lele25g0102 259 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Lele25g0102 259 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Lele25g0102 259 CDD AP2 38 98 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0102 Lele-ChrLele25 665855 666634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0102 15 115 AP2-EREBP Transcription Factor Family AT1G75490 78.218 1.75e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele25g0102 AP2 8.3e-15 CL0081