Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0092 ATGGAAGCTTTGAATCGTGTTTGCATTGGCCTTTGCACTCCTCTTCTGCGTCCACCACTGCATACTCGAAAGTCTAAAAAAAGCAATTCCCATAATGGAGGCAGCAGCAGCTCTGTGGCGGCCACGTGCTCCGCCAGCAAATGGACCGAACGCCTCATTTCCGATTTTCAGTTCCTCGGGGACTCCCCGGACCACCACCATTCGATATCCTCGTCCGTCGCTACTCTCACTCCCACTCTTCCCCTTCCTCCGAGACTCGACCCTCCCGAACGCTATGTTTCCGTGCCCCTTGACTTCTATCGGGTTCTTGGAGCTGAAACGCATTTCCTCGGTGACGGCATTCGAAGAGCTTTCGAAGCTAGGGTCTCAAAGCCTCCTTCGTATGGGTTCAGCCACGATGCGTTAATCAGCCGCAGACAAATACTTCAAGCTGCATGTGAAACCCTTGCCGATCCAGGATCAAGGGGAGACTACAACCAAAGCCTTGTCGATGACGAGGAGGGAACCATTGTCACCCAAGTCCCCTGGGACAAGGTTCCTGGGGCTCTGTGCGTTTTGCAAGAAGCTGGAGATTCTGAGTTGACACTTCAGATTGGCGAAAGTTTGCTCAGAGAGAGGCTACCCAAATCGTTTAAGCAAGATGTTGTCTTGGTGATGGCCCTTGCTTACGTTGACTTGTCAAGGGACGCTATGGCGTTGTCCCCTCCTGATTTTATTGCTGGTTGTGAGTTGCTTGAGAGGGCATTGAAACTCCTGCAGGAAGAAGGGGCCAGTGGCCTAACACCGGATTTAAAAGCTCAAATAGATGAGACACTAGAAGATATTACCCCACGATGTGTTTTGGAGCTTCTAGCCTTACCTATTTGTGATGAATATCAATCAAGGAGGGAGGAAGGTCTTCATGGTGTACGCAACATTCTGTGGGCTGTTGGAGGAGGGGGAGCAGCAGCAATTGCTGGTGGCTTTAGCCGTGAAGGTTTCATGAATGAGGCCTTTTTACATATAACAGCAGCTGAGCAGGTTGATCTCTTTGTTGCCACACCAAGTAATATTCCGGCTGAAAGTTTTGAAGTGTATGGAGTGGCACTTGCATTGGTTGCACAAGCTTTTGTAGGTAAAAAGCCACATCTTATCCAGGATGCTGATAACTTATTCCAACAACTTCAGCAAACTAAGATTTCAACCGTTAAGAATGTTGCCTCTATCTATTCTCCCAAAGAGAATAGGGAGGTTGACTTTGCTTTAGAGAGGGGCCTCTGTGCATTGCTTGTGGGAGAGCTTGATAAATGTCACTCGTGGTTGGGACTAGACAGTGAAAGCTCCCCTTATAGAAACCCATCTATTATGGAATTTATTTTGGAAAACTCAAAGGACGATGATGACAGTGAACTTCCTGGACTTTGCAAATTATTGGAGACATGGTTGATGGAGGTGGTTTTTCCCAGATTTAGAGATACTAAAGATATAAGATTCAAGCTTGGAGATTACTATGATGACCCTACAGTGCTGAGGTATCTGGAGAAGCTGGAGGGCGCAGGCCATTCACCATTGGCTGCTGCTGCAGCCATAGTGAAAATTGGAGCCGAGGCTTCTGCTGTTATTGGCCAGGTGAGGACTAGTGCTATTAACACATTGCAGAAGGTATTTCCTATTGTTTCTGAAGATCAAATTGTGAAGCCTCACGATAGCAGTAAGATGGATTATTTTGTTCCTGATAAAATTGAGGATCCTCTGATAATAACAGACCAAGATAAGTATGCTAGCGTGGAGATTTCTGGCATAAAGAATTCTGGTGAAATAAGTGAAGACGAGTTTACTACTAACAAGATTAAAGAGGCAACAGTGAAGATCATGTGTGCTGGTGTTGTAATTGGACTAGCAACTTTGGTTGGCCTAAAGTACTTACCTACTAGGAATGGCTCGCCCATTCTACAGAAAACAACTGGTTTGGCAATGGCCTCGGATGCTATCAATGGAGGTTCATTAGGAGATGAAAAATCTGGGGAGCAACAACAAAAAATGGATGCTAGAAGTGCAGAAGCTCTAGTTCGCAACTGGCAAAATATCAAATCCCAAGCTTTTGGACCTGATCATTGTCTGGGAAAATTGCAAGATGTTTTGGATGGTGAGATGCTGAAGATATGGACTGATCGTGCAGTGGAAATTGCACAGCTTGGTTGGTTCTATGACTATACCTTGTTGAGCCTCAACATTGATAGTGTGACTATATCGCAGAATGGACGACGAGCAGCAGTTGAAGCGACTCTCAAAGAGTCAACCCACCTTACTGCTATTGGTCACCCCGATCATAATGCCTCAAACGTTAGAATCTACACGACGAGATATGAGTTGTCTTGTTCTGGATCTGGGTGGAAAATTGTTGAAGGAGCAGTGCTTGAGTCATGA 2406 0.4597 MEALNRVCIGLCTPLLRPPLHTRKSKKSNSHNGGSSSSVAATCSASKWTERLISDFQFLGDSPDHHHSISSSVATLTPTLPLPPRLDPPERYVSVPLDFYRVLGAETHFLGDGIRRAFEARVSKPPSYGFSHDALISRRQILQAACETLADPGSRGDYNQSLVDDEEGTIVTQVPWDKVPGALCVLQEAGDSELTLQIGESLLRERLPKSFKQDVVLVMALAYVDLSRDAMALSPPDFIAGCELLERALKLLQEEGASGLTPDLKAQIDETLEDITPRCVLELLALPICDEYQSRREEGLHGVRNILWAVGGGGAAAIAGGFSREGFMNEAFLHITAAEQVDLFVATPSNIPAESFEVYGVALALVAQAFVGKKPHLIQDADNLFQQLQQTKISTVKNVASIYSPKENREVDFALERGLCALLVGELDKCHSWLGLDSESSPYRNPSIMEFILENSKDDDDSELPGLCKLLETWLMEVVFPRFRDTKDIRFKLGDYYDDPTVLRYLEKLEGAGHSPLAAAAAIVKIGAEASAVIGQVRTSAINTLQKVFPIVSEDQIVKPHDSSKMDYFVPDKIEDPLIITDQDKYASVEISGIKNSGEISEDEFTTNKIKEATVKIMCAGVVIGLATLVGLKYLPTRNGSPILQKTTGLAMASDAINGGSLGDEKSGEQQQKMDARSAEALVRNWQNIKSQAFGPDHCLGKLQDVLDGEMLKIWTDRAVEIAQLGWFYDYTLLSLNIDSVTISQNGRRAAVEATLKESTHLTAIGHPDHNASNVRIYTTRYELSCSGSGWKIVEGAVLES 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0092 801 SUPERFAMILY Chaperone J-domain 96 165 IPR036869 -
Lele25g0092 801 Pfam ARC6-like, IMS domain 679 793 IPR025344 -
Lele25g0092 801 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 14 800 IPR044685 -
Lele25g0092 801 MobiDBLite consensus disorder prediction 20 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0092 Lele-ChrLele25 564643 568645 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0092 25 564643 568645 Lele27g1992 27 24148463 24156749 hybridization
Lele25g0092 25 564643 568645 Lele28g0101 28 574732 591071 hybridization