Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0090 ATGTCCACTGTCCATCATCCAGCAGTTTCCAAGTCATCCTTCCCCTTCCCTCTTTACCCATTGCCATCATCCATGACTTCACTTCCTCTTCTCATCCCTTTCCTCTTCTCATCCCTCCTGCTCTCGGCCGAAGCCGCCGGTGGCCGCTGGCAACTTCTCCATAATAGCATCGGCATTGTAGCCATGCACATGCAGTTACTACACAACGACCGTGTTGTCATCTTCGACCGCACCGACTTTGGCTTCTCCAATCTATCCCTGCCTCTTGGCAAATGCCGCTACAACCCAAACGAGCAGGTTGTTAAGGTCGACTGCACTGCTCACTCCATCGAGTACGACGTCGCCTCCAATTCTTTCCGCCCACTATTTGTCCAGACTGATGTCTGGTGCTCCTCTGGTTCCGTCACCCCCGACGGCCGTCTCGTTCAGACCGGCGGCTTCAACGACGGGGAACGTGCTGTCAGGGTGTTCAGTCCTTGCCCCACCTGTGACTGGCAGGAACAAAATGGCGCACTCGCAGCTCGCAGGTGGTACGCCACTAATCACATTCTGCCCGATGGACGCCAGATTGTCATCGGCGGCAGGAGGGCATTTAACTACGAATTTTACCCCAAAGCACCTGCCGCCAAAAATGTCTACAGTTTACCCTTTCTAGCGCAGACGAAAGACCCCGGTTCTGAGAACAACTTGTACCCTTTCGTTTTTTTGAACGTGGACGGCAATTTGTTCATCTTCGCCAACAATCGAGCTATCCTGTTCGATTACAGGAAGAACAGGGTGGTCAAGACATTCCCAGAAATACCGGGAGGAGATCCGAGGTGTTATCCGAGCACCGGATCGGCGGTCTTGTTACCCTTGAGGAATTTGCGAAAGGCATCGATCGAAGCGGAGGTTTTGATTTGTGGCGGAGCCCCGAAAGGTTCTTTTGAGCAGGTCAACCAGAGGAGTGTTTTCCTCGGAGCCTTGAATACCTGCTCTCGGATTAAAATAACCGACCCCAACCCGCAGTGGGTCACCGAGGAGATGCCCGGAGCCAGAGTCATGAACGACATGCTCATTCTTCCAAACGGCAACGTTTTGATAATCAATGGAGCAGCCCTGGGCACGGCCGGATGGGAATTGGGGCGGAACCCGGTGTTGAACCCGGTTATTTACAAACCGGATAGCCCGCTCGGATCTCGGTTCCTGTCGCAGAACCCGTCCAATATTCCGCGGGTTTACCACTCGAGCGCAATTCTGCTTCGAGACGGTCGAGTGCTTGTGGGAGGTAGCAACCCCAACGTATACTATAATTTCACGAAAGTGTTATTTCCGACGGAGCTGAGGTTAGAGGCGTATTCTCCATGGTATTTGGAGGCAGAGTTTTCAAGCGTGCGTCCGAAGATTCTAACGCCTGCTTCTCAGAGCAAGGTCACGTATGAGGGCAGGTTGGTGGTGAGATTCCAGGTGAAGGCAACGTTGGCCCAAAATTCGGTGTCGGTGACGATGTTGGCGCCACCTTTTAACACGCACTCTTTCTCTATGAACCAGAGGCTGTTGGTGTTGGACGTTATTAAAGTATCCAACGTCGGGGAATTGACATACGACGTTGAGGTTGTCACCCCCGGTTCGTCTGTCCTGGCACCACCCGGTTTCTATCTGCTGTTTGTGGCTCATCAAGAAATTCCCAGCGATGGTATTTGGCTCCAAATACTATGA 1698 0.5271 MSTVHHPAVSKSSFPFPLYPLPSSMTSLPLLIPFLFSSLLLSAEAAGGRWQLLHNSIGIVAMHMQLLHNDRVVIFDRTDFGFSNLSLPLGKCRYNPNEQVVKVDCTAHSIEYDVASNSFRPLFVQTDVWCSSGSVTPDGRLVQTGGFNDGERAVRVFSPCPTCDWQEQNGALAARRWYATNHILPDGRQIVIGGRRAFNYEFYPKAPAAKNVYSLPFLAQTKDPGSENNLYPFVFLNVDGNLFIFANNRAILFDYRKNRVVKTFPEIPGGDPRCYPSTGSAVLLPLRNLRKASIEAEVLICGGAPKGSFEQVNQRSVFLGALNTCSRIKITDPNPQWVTEEMPGARVMNDMLILPNGNVLIINGAALGTAGWELGRNPVLNPVIYKPDSPLGSRFLSQNPSNIPRVYHSSAILLRDGRVLVGGSNPNVYYNFTKVLFPTELRLEAYSPWYLEAEFSSVRPKILTPASQSKVTYEGRLVVRFQVKATLAQNSVSVTMLAPPFNTHSFSMNQRLLVLDVIKVSNVGELTYDVEVVTPGSSVLAPPGFYLLFVAHQEIPSDGIWLQIL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0090 565 Pfam Glyoxal oxidase N-terminus 62 303 IPR009880 -
Lele25g0090 565 SUPERFAMILY E set domains 456 564 IPR014756 -
Lele25g0090 565 Pfam Galactose oxidase-like, Early set domain 459 564 IPR015202 -
Lele25g0090 565 SUPERFAMILY Galactose oxidase, central domain 94 452 IPR011043 -
Lele25g0090 565 CDD E_set_GO_C 455 564 IPR015202 -
Lele25g0090 565 Gene3D - 44 457 IPR037293 -
Lele25g0090 565 Gene3D Immunoglobulins 458 565 IPR013783 -
Lele25g0090 565 FunFam Aldehyde oxidase GLOX 44 457 - -
Lele25g0090 565 PANTHER SECRETED PROTEIN-RELATED 42 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0090 Lele-ChrLele25 539074 540771 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0090 25 539074 540771 Lele28g0100 28 565928 569495 hybridization