Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0089 ATGAGTAGTTTCGAATATAGACCCTGTAAGTCAATGGACGGTGATCAAGGTATCGACCCAGCCAGTGCTGGTACTGCTACTGGTATGCAACGAATCAATTCCGCATTTGGTGATACTCCGAGGCCACAAAACCGATTCCATGCCCCCAATCCCAATTTCAGTGCCTCTCAAATGGGCGGTTCTGCGTTTCTGATGCAACAAAACTTGAGTCCTGAGAATCTGAAACCTGGTATACCTCCATCCCACCCTAATATCCCAACTTCATCGCATTATCCCCAAATTTTAGAGTTCCAATCGGCTCCCCAGCAATTACGTTCTCCGATTATGAAACCGCGCTCTTCCCATTCACGGTCTTTGTCTCAACAGTCATTTTTTACCCCGGATTGCTTGCCCCCATTGAGTCCTTCACTTTATTGTGAGCCCTTGGCTACCCCTCTTTCTAACTCGATTTCCACAGATGTGTCTATGGAAGAAAGAGTGGTTAACTCTCATGGCCCTGGCATTTCTATGCCCATAAATAGGGATCACGCCTTTCAGGCTGGTCCTAGTGTTCTTCCTCGTAAAGGACACAGGCGCTCCAGCAGTGATACTCCATTAGGAATCTCTGGCTTCTTTCAATCTTCTCCTCATTTGGTTCCCTCTCCTGCTTGGATGAATTTGGACAATTCAATTTCTAGTGGAGAAGGCTTGGGATTGGAGAAGCCAATTCAGTTGGTAAAAAAGGAGCCAAAAAAGGACGAGGGTCATGTTGATTGTCACAATGCAAAACCTATGATTGAGAGGAAAGAGGATGTGATGGATGATTTGATTAGCGTGTATATGAATTTGGACAACTTTGATAATATGAACTTATCTGGTGCGGAAGAATCAAAGACTTTTGAAAGCAGTGATAATGAAGTTGAGAGTCTCATAAGTGGAAAAACAACCTCTACACAAGGGGCAACTTCAAGCTTCGTGGAGGAAAGGAGGGAAGGAATTAAGAGGAGTTCTAATGGGGACATTGCACCAGGTTCCCGACATCGGAGAAGTTTTTCCTTGGATAGTTCTATAGGAAATTTGCATATTGGAGATGAATCACCGAAGCTTCCTCCTTTGGGGAATGGAGTTGGGCAGCACTCTCCTAGCAATTCGGCAGATGGTAAGACATTTGAAATCGACATGGAGTTGAGAAATGGTGAATTCACTGAACTGGAGCTAAAAAAAATAATGGAAAGTGATAAGCTTGCTGAGATTGCTTTGTCAGATCCCAAGCGTGCAAAACGAATATTAGCTAATCGTCAATCAGCTGCTCGATCCAAGGAGCGGAAGGTGCAGTACATTGCTGAACTGGAGCACAAGGTGCAAACTCTTCAGTCAGAGACAACCACAATGTCTACTCAATTTACTAAATTGCAGAGGGATAGCTCACAGCTTAAAAGCGAGAACAGTGAATTGAAATTCAGGCTTCAAGCCATGGAACAACAGTCCCAACTGAAAGATGCTCTGAATGAGACCTTAACTGCTGAAGTCCAGCGTTTGAGGCTTACCGTCACGGAACTTGGTGGAGAGTCTATTCTCTCGGGTTGCATGGCTCGCCAACGTGGTATTAATCAACAAAGGTTCCAATTGCAACATGAGCAGCCTGGCCAACTTAAACGATCACAAATGCAAAATCAGTCTCAGGAGGAGACCCAGACTCAATCGCACTAG 1689 0.4476 MSSFEYRPCKSMDGDQGIDPASAGTATGMQRINSAFGDTPRPQNRFHAPNPNFSASQMGGSAFLMQQNLSPENLKPGIPPSHPNIPTSSHYPQILEFQSAPQQLRSPIMKPRSSHSRSLSQQSFFTPDCLPPLSPSLYCEPLATPLSNSISTDVSMEERVVNSHGPGISMPINRDHAFQAGPSVLPRKGHRRSSSDTPLGISGFFQSSPHLVPSPAWMNLDNSISSGEGLGLEKPIQLVKKEPKKDEGHVDCHNAKPMIERKEDVMDDLISVYMNLDNFDNMNLSGAEESKTFESSDNEVESLISGKTTSTQGATSSFVEERREGIKRSSNGDIAPGSRHRRSFSLDSSIGNLHIGDESPKLPPLGNGVGQHSPSNSADGKTFEIDMELRNGEFTELELKKIMESDKLAEIALSDPKRAKRILANRQSAARSKERKVQYIAELEHKVQTLQSETTTMSTQFTKLQRDSSQLKSENSELKFRLQAMEQQSQLKDALNETLTAEVQRLRLTVTELGGESILSGCMARQRGINQQRFQLQHEQPGQLKRSQMQNQSQEETQTQSH 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0089 562 Coils Coil 468 488 - -
Lele25g0089 562 CDD bZIP_plant_RF2 418 467 IPR044759 GO:0003700|GO:0006355
Lele25g0089 562 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 415 478 IPR004827 GO:0003700|GO:0006355
Lele25g0089 562 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 102 559 - -
Lele25g0089 562 MobiDBLite consensus disorder prediction 290 343 - -
Lele25g0089 562 SMART brlzneu 413 477 IPR004827 GO:0003700|GO:0006355
Lele25g0089 562 Gene3D - 416 469 - -
Lele25g0089 562 MobiDBLite consensus disorder prediction 290 318 - -
Lele25g0089 562 Coils Coil 433 453 - -
Lele25g0089 562 MobiDBLite consensus disorder prediction 26 58 - -
Lele25g0089 562 MobiDBLite consensus disorder prediction 530 562 - -
Lele25g0089 562 MobiDBLite consensus disorder prediction 70 89 - -
Lele25g0089 562 FunFam probable transcription factor PosF21 416 469 - -
Lele25g0089 562 SUPERFAMILY Leucine zipper domain 417 472 IPR046347 GO:0003700|GO:0006355
Lele25g0089 562 Pfam bZIP transcription factor 417 475 IPR004827 GO:0003700|GO:0006355
Lele25g0089 562 MobiDBLite consensus disorder prediction 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0089 Lele-ChrLele25 531912 534991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0089 29 512 bZIP Transcription Factor Family AT4G38900 45.261 3.52e-104 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele25g0089 bZIP_1 4.5e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0089 25 531912 534991 Lele27g1995 27 24181260 24184367 hybridization
Lele25g0089 25 531912 534991 Lele28g0099 28 559765 562908 hybridization