Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0085 ATGGGTTCTGTTTCTCTTAAAATAGGGGATGGCACTGCCAGATTTAAGCGAGCCACTTTTTGTTCTTCGGCAGTCAACATTCTCATGATCTTCTGTGTTATCACTACCAATCTTTTTGCCCTATATGCTTTCACTGCTTCCCCAAAACACCATAGTAACCACCTGTTTCTCCATACTCAAAAGAACCTCTCTCTCATTTCTGAACAGGTCTCTCTGATACTGAGAGAGATCGATTCGTCCCAGAAAAAATTGGCCCAGATGGAGAAGGAGCTTCTTGGCTATGAAAATGTTGACCTTTCCAGACCTAATATTGCTAGCGAACTTAAACTCTATCTCCAGCACCACCAGCTCCCTCTGGGCAAAGATTCGAGAACTGGGATCACTGAAATGGTCGCCTCAGTTGGTCATTCCTGTGAGAAATCTGCGGATTTATTGTCTCAATACATGAATTACAAGATTGCTGGACCTTGCCCCGATGATTGGAGTTCAGCGCAGAAACTGATCTTGCGCGGATGTGAGCCTTTACCGAGGAGGAGGTGCTTTGCTAAATCTGTTTCTAAGGTAGGTCTTTGTCCTTTTCCCATTTCCCTTTGGAAACCTGTGGGTAATAAGACTGTTAACTGGAGTGGCCTGGGTTGTAAGAATTTTGAATGTTTGAATGGTAAGCAATTGGGTAGAGATTGCATCGGTTGCTTTGATTTGGTTAATGGCTACGAGAATCAGAGATATGTTAAAGCTAGAGGTAAGAATGATTTTGTCATTGACGATGTGTTGGCATTGGCAAGTGGAGGGATTAGAATAGGGCTCGACATTGGAGGTGGGTCCGGATCCTTTGCGGCTAGAATGGCCGATAGGAACGTCACCGTGATTACCAACACTCTGAACATAGACGCACCATTCAGCGAATTCATTGCTGCAAGAGGGCTTTTCCCTCTTTTCTTAAGCTTAGATCATAGGTTCCCATTCTATGACAACGTGTTTCATTTGGTTCATGCGTCTAGTGCCTTGGATTTGGGAGGGAAGCCTGAAAAACTGGAGTTTTTAATGTTTGACATTGATCGAATTTTGTGTGCGGGTGGCTTGTTTTGGGTGGATAACTTCTACTGTGCCAATGATGAGAAGAAGGCCGCCTTAACTCGTTTAATTGAACGTTTTGGATATAAGAAGTTGAAATGGGTTGTGGGAGAGAAGGTTGATGGTGTGGGATCAGGCAAATCTGAAGTCTTATCTGCTGTGCTTCAGAAGCCTGTAAGAGTGTAA 1260 0.4389 MGSVSLKIGDGTARFKRATFCSSAVNILMIFCVITTNLFALYAFTASPKHHSNHLFLHTQKNLSLISEQVSLILREIDSSQKKLAQMEKELLGYENVDLSRPNIASELKLYLQHHQLPLGKDSRTGITEMVASVGHSCEKSADLLSQYMNYKIAGPCPDDWSSAQKLILRGCEPLPRRRCFAKSVSKVGLCPFPISLWKPVGNKTVNWSGLGCKNFECLNGKQLGRDCIGCFDLVNGYENQRYVKARGKNDFVIDDVLALASGGIRIGLDIGGGSGSFAARMADRNVTVITNTLNIDAPFSEFIAARGLFPLFLSLDHRFPFYDNVFHLVHASSALDLGGKPEKLEFLMFDIDRILCAGGLFWVDNFYCANDEKKAALTRLIERFGYKKLKWVVGEKVDGVGSGKSEVLSAVLQKPVRV 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0085 419 Gene3D Vaccinia Virus protein VP39 232 398 IPR029063 -
Lele25g0085 419 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 248 382 IPR029063 -
Lele25g0085 419 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 261 367 IPR004159 GO:0008168
Lele25g0085 419 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 24 418 - -
Lele25g0085 419 Coils Coil 70 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0085 Lele-ChrLele25 505533 506792 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0085 25 505533 506792 Lele27g1999 27 24207091 24209906 hybridization
Lele25g0085 25 505533 506792 Lele28g0094 28 536678 537937 hybridization