Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0080 ATGTTTCAGATGGACCGGCGGTGGCCCTGGAAGAAAAAATCATCTGACAAGGCAGTGCTTGACAAAGCAGCTGCCGCACTGGACTCTGTTAGCGCTTCCTCCCAGGGCAATCAGGATAACTGCAAAAAACCAAACTATGTCCAAATTTCTGTGGAGTCATATTCACATCTGACTGGTTTGGAGGATCAAGTGAAGACATATGAGGAAAAAGTTCAGACTCTGGAGGATGAGATCAAGGAACTGAGTGATAAGCTGTCAGCGGCAAATTCAGAGATGACAACCAAGGAAAACCTTGTAAAACAACATGCAAAAGTAGCTGAAGAAGCTGTCTCAGGATGGGAAAAGGCTGAAGCAGAAGCTTTGTCATTGAAGAATCATCTAGAATCTGTCACTCTTGCAAAACTCACTGCTGAGGATCGTGCATCACATCTAGATGGTGCTCTTAAAGAGTGCATGCGACAGATACGAAACCTGAAGGAAGAACATGAAGAGAAAATACAAGAAGTTGCTCTCTCTAAAACCAAGCAGCTGGACAAGATTAAGGGGGAGCTTGAGGCAAAGATTGATAACTTAGAACAGGAACTCCTAAGGTCAGCTGCTGAAAATGGGGCACTTTCAAAGTCTTTGCAGGAGCACTCCAACATGCTAATTAAAATAGGTGAAGAAAAGGCTCAAGCTGAGGCTGACATTGAGCTTCTGAAGGGCAACATAGAATCATGCGAAAGAGAAATCAATTCACTTAAATACGAACTTCATCTTGTCTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAGAACATGAGTATGAGATCTGCAGAAGCTGCCAACAAGCAGCATGTGGAGGGGGTAAAAAAAATTGCCAAATTAGAGGCAGAATGCCAAAGATTACGTGGTCTTGTGCGGAAAAAGTTACCCGGTCCTGCAGCACTTGCGCAGATGAAGCTAGAAGTTGAGAGTCTCGGCCGAGATTATGGAGAAAATAGACTAAGGAAGTCTCCTGTCAAGCCTGCTAGTCCTCACATGTCTCCTCTGCCTGACTTCTCCTTGGAGAATGCACAGAAATTCCAGAAAGAGAATGAATTTCTTGCGGAGCGTTTATTGGTAGTGGAAGAAGAAACTAAGATGCTCAAAGAAGCTTTGACTAAACGTAACAGTGAATTGCAGGCCTCAAGAAGCATGTGCGCAAAAACCTTAAGCAAGCTTCAAACCTTGGAAGCTCAACATCAAACATGTAACCAGCAAAAAGGATCTCCAAAATCCATAACCCGGATGACCCATGAAAGTATTTATAGTCACAATGCAAGCTATGCACCAAGTATAACCTCCATATCTGAAGTGGGAAACGATGATGAATTAAGCTGTGCTGAATCTTGGGCTACAACATTAATGTCTGAGCTCTCCCAATTTCAAAAGGAAAAGAATACTGTGAAATCAAGCAAACCTGAATCAACAAATCAGTTGGGATTGATGGATGATTTTCTGGAGGTGGAAAAGTTGGCTCATCTATCAAACAATTCTAATGAAGTTACCTCTGTTTCAATTTCTTCTAACAAGACATCTGAAGTTGTGACCAATGATGTATGGAAGATCAATAATGGCATAGATGATTCTTCTGATAAACAGATTGTTTCAGATCCACTGTCAAATCTGGAGCCTTCTGTTGCAGCGTTGTCAGCACCCGATCCTGGAGCTGATGTTGATGGATCTTCATTGGCAGAGCTTCAATCAAGAATATTGTCAGTTTTCAAGTCCATGTCTAAGGATTCCGATAAAGGAAAGGTCCTGGAGGATATTAAACATATTCTGGAGGATGGACAAGACACTTTTGTCCAGCACTCTTCAGGTTGCATTTCTCAGGTTGTCCAACCGCTCCAGCCTTCTGATTCTCCATGTGATAGGCATGTTAATCCTGAAGATGCTGGCTTAAGTGCTGAAAAGGATTCCACTTTATCCCAGCAAGCAACAGAATGTGTGCAGATAACTTTCAATATAGAGGCTGCAATTTCCCAGATTCATGACTTTGTATTGTTCTTAGGCAGAGAAGCTATGGCCGTTCATGACACATCTTGTAATGTAGATGGAATGAGCCAAAAGATTGAGGAGTTCTCTGTCACTTTTAATAAAGTTCTACGTAGTGAAGCAAGTTTGTCGGAATTTGTTCTTGACCTGTCTTGTGTTTTAGCAAAAGCAAGCAAGTTCAGATTTAATGTCCTTGTCTACAAGGGTGCAGAAGCTGAAAATAACAGTCCTGATTGCATTGACAAGATTGCCTTGCCAGAAAATAAGTTAACTCAAGATGGTTCACCTGGAGAGAAATATCAAAATGGTTGTTCTCATATTCTAAATCCTTGTTCTGATCCTGAGGTTCCTGATGATGGAAATCTTGTCTCGGCCTTTGAACCAAATGCTGCATTCAAAAAATTCTCAATGGAGGAGTATGAAGAATTGAAATTAGAGAAAGAGAAGGCGGCAATGGATCTGTCAAGATGCACTGAAAGTCTTGAAACGACGAAGTCTCAATTACTGGAAACTGAGCAACTTCTGGCGGAAGTTAAATCACAGTTGGTTTCCACTCAAAAATCTAATAGCTTGGCTGAGACACAGCTGAAGTGTATGGCAGAGTCATACAGGTCACTTGAAACACGTGCCCATGAGTTAGAAACTGAGCTAAATCTTTTGCTAGTTAAGACCGAAACTCTAGAGAATGAACTTCAAGATGAAAAGAGGGGTCATGAAGATGCTTTGGCCAAGTGTAAGGAGCTAGAAGAGCAATTACAAAGGAATGAGAATTCAGCAGCTGATGGTGACCAGAAGACCAAGCAGGAGAGGGATCTGGCAGCTGCTGCCGAAAAGCTAGCTGAGTGTCAGGAAACCATTTATCTTCTTGGCAAGCAGTTGAAAGCTTTGCATCCTCAAACAGAGCAAAATGAATCTCCATACGGTGGAAGAAGTCCAAAGGTTGGAGGCTTCCCGGAGGATGAACCTACAACTAGTATCCCAAATTTGCAAGAACTAGATCAGGCCGAGTTGGAGAATGCTACTTCTGCATATATGCAGAAATTAGGCGGGGGGTCGCCTCTACACTTCTCTAACACCGTCTACAGTCCATCAGACAATGAAGCAATTCCGGACAGATCCCCGGTGAGGCCTCCAAAACATAGGCCTACGAAGTCAACCTCCTCATCTGCCTCCTCCACTCCTACACCAGAGAAACACGCACGAGGCTTTAGTAGATTCTTTTCATCCAAGGGAAAGAACGGTCACTGA 3267 0.427 MFQMDRRWPWKKKSSDKAVLDKAAAALDSVSASSQGNQDNCKKPNYVQISVESYSHLTGLEDQVKTYEEKVQTLEDEIKELSDKLSAANSEMTTKENLVKQHAKVAEEAVSGWEKAEAEALSLKNHLESVTLAKLTAEDRASHLDGALKECMRQIRNLKEEHEEKIQEVALSKTKQLDKIKGELEAKIDNLEQELLRSAAENGALSKSLQEHSNMLIKIGEEKAQAEADIELLKGNIESCEREINSLKYELHLVSKELEIRNEEKNMSMRSAEAANKQHVEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDYGENRLRKSPVKPASPHMSPLPDFSLENAQKFQKENEFLAERLLVVEEETKMLKEALTKRNSELQASRSMCAKTLSKLQTLEAQHQTCNQQKGSPKSITRMTHESIYSHNASYAPSITSISEVGNDDELSCAESWATTLMSELSQFQKEKNTVKSSKPESTNQLGLMDDFLEVEKLAHLSNNSNEVTSVSISSNKTSEVVTNDVWKINNGIDDSSDKQIVSDPLSNLEPSVAALSAPDPGADVDGSSLAELQSRILSVFKSMSKDSDKGKVLEDIKHILEDGQDTFVQHSSGCISQVVQPLQPSDSPCDRHVNPEDAGLSAEKDSTLSQQATECVQITFNIEAAISQIHDFVLFLGREAMAVHDTSCNVDGMSQKIEEFSVTFNKVLRSEASLSEFVLDLSCVLAKASKFRFNVLVYKGAEAENNSPDCIDKIALPENKLTQDGSPGEKYQNGCSHILNPCSDPEVPDDGNLVSAFEPNAAFKKFSMEEYEELKLEKEKAAMDLSRCTESLETTKSQLLETEQLLAEVKSQLVSTQKSNSLAETQLKCMAESYRSLETRAHELETELNLLLVKTETLENELQDEKRGHEDALAKCKELEEQLQRNENSAADGDQKTKQERDLAAAAEKLAECQETIYLLGKQLKALHPQTEQNESPYGGRSPKVGGFPEDEPTTSIPNLQELDQAELENATSAYMQKLGGGSPLHFSNTVYSPSDNEAIPDRSPVRPPKHRPTKSTSSSASSTPTPEKHARGFSRFFSSKGKNGH 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0080 1088 Coils Coil 352 372 - -
Lele25g0080 1088 MobiDBLite consensus disorder prediction 970 999 - -
Lele25g0080 1088 Coils Coil 834 854 - -
Lele25g0080 1088 Coils Coil 209 292 - -
Lele25g0080 1088 MobiDBLite consensus disorder prediction 1053 1071 - -
Lele25g0080 1088 Coils Coil 806 826 - -
Lele25g0080 1088 MobiDBLite consensus disorder prediction 925 944 - -
Lele25g0080 1088 Coils Coil 57 98 - -
Lele25g0080 1088 Coils Coil 869 958 - -
Lele25g0080 1088 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 4 1083 - -
Lele25g0080 1088 Pfam Filament-like plant protein, long coiled-coil 95 975 IPR008587 -
Lele25g0080 1088 Coils Coil 141 201 - -
Lele25g0080 1088 MobiDBLite consensus disorder prediction 1025 1039 - -
Lele25g0080 1088 MobiDBLite consensus disorder prediction 625 647 - -
Lele25g0080 1088 MobiDBLite consensus disorder prediction 1019 1088 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0080 Lele-ChrLele25 464926 469307 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0080 25 464926 469307 Lele01g1200 01 7178056 7182198 CCT
Lele25g0080 25 464926 469307 Lele02g1469 02 18899628 18903594 CCT
Lele25g0080 25 464926 469307 Lele03g1214 03 7145268 7149235 CCT
Lele25g0080 25 464926 469307 Lele04g1452 04 19747213 19752857 CCT
Lele25g0080 25 464926 469307 Lele27g2006 27 24243492 24248329 hybridization
Lele25g0080 25 464926 469307 Lele28g0090 28 497956 509370 hybridization