Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0077 ATGGATTCCAGATTCAAACGCATCTGTGTCTTCTGTGGCAGCAGTCCTGGCAAGAACCCCAGCTTCCAGCGAGCTGCTCTTCAACTCGCTCACCAACTCGTGGAAAGGAACATGGACTTGGTGTATGGAGGAGGCAGCATTGGGTTGATGGGTTTAGTGTCACAGGCCGTCCATGATGGAGGCCGCCACGTATTAGGAGTTATTCCCAAGACACTTATGCCAAGAGAGATAACGGGAGAAAAGGTGGGAGAGGTGCGAGCCGTATCCGGAATGCACCAACGCAAGGCCGAGATGGCTCGACAAGCCGACGCATTTATCGCCTTGCCAGGTGGATATGGCACCCTGGAAGAACTGTTGGAAGTGATCACCTGGGCTCAACTGGGAATTCACGATAAACCCGTGGGCTTGTTGAACGTAGACGGCTACTACAACTCATTGCTGTCATTCATTGACAAGGCCGTGGAAGAGGGCTTCGTCGCCCCCGCTGCCCGTCACATTATTGTGTCTGCCCAAACTGCCCATGACCTCATGTCCAAGCTCGAGGAATACACGCCCAAGCACAGCGGGGTGGCCCCTAGGCTCAGCTGGGAGATGGAGCAACAGTTGGTTCACACTGCAGAGTCAGACATCTCGCGTTGA 639 0.5446 MDSRFKRICVFCGSSPGKNPSFQRAALQLAHQLVERNMDLVYGGGSIGLMGLVSQAVHDGGRHVLGVIPKTLMPREITGEKVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFVAPAARHIIVSAQTAHDLMSKLEEYTPKHSGVAPRLSWEMEQQLVHTAESDISR 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0077 212 TIGRFAM TIGR00730: TIGR00730 family protein 6 183 IPR005269 GO:0009691|GO:0016787
Lele25g0077 212 Gene3D - 1 182 - -
Lele25g0077 212 PANTHER LOG FAMILY PROTEIN YJL055W 2 202 - -
Lele25g0077 212 SUPERFAMILY MCP/YpsA-like 4 183 - -
Lele25g0077 212 Pfam Possible lysine decarboxylase 50 179 IPR031100 -
Lele25g0077 212 FunFam CASP-like protein 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0077 Lele-ChrLele25 447570 449707 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0077 25 447570 449707 Lele01g1195 01 7135105 7136609 CCT
Lele25g0077 25 447570 449707 Lele02g1465 02 18856963 18858432 CCT
Lele25g0077 25 447570 449707 Lele03g1210 03 7104574 7106047 CCT
Lele25g0077 25 447570 449707 Lele04g1448 04 19702650 19704117 CCT
Lele25g0077 25 447570 449707 Lele27g2009 27 24264510 24266171 hybridization