Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0074 ATGGCTCTCCTTACTTCCTTGCCCCAACAGTCAGATTCAGACCCCGACTCAAAAGTTCCAAAACGCAAGCGAAATAAGCCGCAGAAGAAGCAGAAGCAGAAACCACCGTCTTCATGGGACCAAATCAAGAATCTCCTCACCTGCAAACAGATCCAAGGGTCGAGAGTTCACGACCCCTCCAAAAACCCCACCACAGTGCCCTACTCCAAGCTTGGATCTTCTTGCAGCTCCATCTGCAGCTTCAAGGACGTTGTTCACGGCAACACACGTGTTGTTCACAGACCTGATAACTCCTCGCCGGAGAGCAGTGCTCTGGGTCAGCAGGCTGGGTTACTGAGCCGGAAGCCCCCGAATAACTCGTCATCTCGGCCCGCCAAACCCAACGGCGCTCCAAACTGCACTACATCTTCCAGAGGTATGCAATTCAGGAAACTCTCCGGCTGTTACGAATGTCGCATGATTGTTGACCCTTCCAGGCTCCCGATTCCGAGAAGCACTCTATGTTCTTGCCCCCACTGTGGAGAGGTCTTCCCTAAGATGGAAAGCTTGGAGCTTCATCAAGCCACTCGCCACGCCGTTTCAGAGCTGGGCCCGGAGGATTCGGGTCGAAATATTGTGGAGATAATATTCAAATCAAGCTGGCTGAAGAAGGGCAGCACCATTTGTAAGATCGAACGGATACTCAAAGTCCACAACACCCAGCGCACCATCCAACGGTTCGAGGAGTGCCGAGACGCAGTGAAGAGCCGTGCTCAGTTCAGCGTCAAGAAGAACCCCAGGTGCGCCGCCGACGGCAACGAGCTCTTGCGATTCCACTGCACCAGCCTCTCATGCTCCTTGGGTGCACGTGGCTCCTCCTCCTTGTGCGCCTCTCTCCCCGGCTGCGGTGTTTGCACCATCATCCTCCACGGGTTCAAGGGCAAGTCTGATAGTGCCGGCGCCGCTGGACAGCCACACTGCAAAGGAGTGCGGACCACGGCCAGCAGCGGCAGGGCACACGACCCCTTGCAGTGTACCGACACCAGGAGGGCGATGCTGGTGTGCCGTGTCATTGCCGGGAGGGTGAAGCGCGTGGCGGAGGAGATGCCGGCGGAGGAGGAGACTGTGTCGGCTGGTTCTTATGACTCGGTAGCTGGGTGCGCCGGGATCCACTCGAATCTCGAGGAGTTGGTAGTGTTCAATCCAAAGGCTATCCTTCCTTGTTTCGTTGTCATTTACAAAGTGGTGCCATGTTGA 1236 0.5615 MALLTSLPQQSDSDPDSKVPKRKRNKPQKKQKQKPPSSWDQIKNLLTCKQIQGSRVHDPSKNPTTVPYSKLGSSCSSICSFKDVVHGNTRVVHRPDNSSPESSALGQQAGLLSRKPPNNSSSRPAKPNGAPNCTTSSRGMQFRKLSGCYECRMIVDPSRLPIPRSTLCSCPHCGEVFPKMESLELHQATRHAVSELGPEDSGRNIVEIIFKSSWLKKGSTICKIERILKVHNTQRTIQRFEECRDAVKSRAQFSVKKNPRCAADGNELLRFHCTSLSCSLGARGSSSLCASLPGCGVCTIILHGFKGKSDSAGAAGQPHCKGVRTTASSGRAHDPLQCTDTRRAMLVCRVIAGRVKRVAEEMPAEEETVSAGSYDSVAGCAGIHSNLEELVVFNPKAILPCFVVIYKVVPC 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0074 411 MobiDBLite consensus disorder prediction 90 138 - -
Lele25g0074 411 ProSitePatterns Zinc finger C2H2 type domain signature. 168 191 IPR013087 -
Lele25g0074 411 ProSiteProfiles Zinc finger C2H2 type domain profile. 168 196 IPR013087 -
Lele25g0074 411 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 37 406 - -
Lele25g0074 411 FunFam C2H2-like zinc finger protein 192 407 - -
Lele25g0074 411 Gene3D - 184 408 - -
Lele25g0074 411 SUPERFAMILY ADP-ribosylation 193 407 - -
Lele25g0074 411 MobiDBLite consensus disorder prediction 92 138 - -
Lele25g0074 411 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0074 Lele-ChrLele25 432841 435072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0074 1 409 C2H2 Transcription Factor Family AT1G75710 60.814 2.42e-171 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele25g0074 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0074 25 432841 435072 Lele28g0085 28 466923 469091 hybridization