Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0053 ATGTTTACTGCCCCGGATTCTTCCTCTGATAATCACTCGCCGACTAGTGCTGGAGATACCAATAGCCCTAAGTTCGCGCGAAAAAACCTGCCATCTGCTTGGGCCCAAGTTGTACGAGGTGGGGAGTGCGAATCTCGTCCATCGCCGCCCTCATCATCTTCCTCTTCGTCATCCCTAACGAACTGCGTGCCTGACCAACCACCATTCTCTGATTTTCCTCAGAAGGAGGCACCTAAGTCGCAGGTGCCGGATAACTCTAATGCTGCTGGCGCAGATGCTTCCGACGCCAATGCGGGTCGTTCTAAGAGGCCCGCCTGGAGCAAGCCTTTTAACGGCGTTGTCGAGGCTGGTTCAGTAATGGGTGCTGTTTCTTGGCCCGCATTATCTAAATCCACGAAGGTCTCGACCAAAATATCAGCTGACTCCACGTCTAAGACTGCATTTGATGGATCACTCCCCACTTCTCAGGGGTCTGGCACTTTACAATCCCCTCAAAAGCAACCTACTAACAATGCAAAGCCTAACTCTGCAACAAACTATGCTGTGCATCATAGACAAAGGTCAATGAATCGTGGAGGGAGCAACAGCATTGGGGTTGGTCATGCTCAGAGCAGCTTTTCTAACCCTCCCCCACCTCCACCGCCACCGCCCTTTCCTGTATTTCCTATACCGGTAACTAGCTATGGTAATGTGGTGCCAGATCATCCTCCAAGGGAAATCCCTTACAGGAACAATAACTGGGATACAAGAGCACCTGTTGGGGGTTTTGTGCCTGCTGTTAATGATCACTGGAATCCCCCCCGCAGAGGCAACTTCGGGCCCCATCAACGTGGGGATGGATCCTATCATAATAATCATGGGAATAGGCGTGACCAGGATCGAGGAAATCATGCAAACACTAGAGATGCTCAAGCATACCAGCAGAGGATGTCTCCTAGGGGATTAGTGAGGCACCCGCCTCCTAATACTCCTGCATTTGTTGCCCCTCCACCCATGGGACCCTTTGCAAACCCCATGGGTTTTCCAGAATTTTATTATTTCCCAACTCTACCACTAGAGCCATTCAGGGGGATGCCGTTCATTACTCATGGTCCTCCTCCTGCCATGTTTCTCCCAGCTGCAGAAACTGCTTTGACAAATATGCTAATGAACCAAATTGATTACTACTTTAGTGATGCTAATCTAGTGAAAGATGAGTTTTTAAAATCCAACATGGATGAACAGGGTTGGGTTCCCGTTGCTTTGATAGCAAACTTTCGTCGGGTTAAAAGTTTGACAAACAATATTCAGGTGATACTGGATTCGTTGAGAAATTCTACAGTTGTGGAAGTACAGGGTGACAAGTTGCGGAGACGTCATGATTGGATGAAGTGGCTGCCCTCATCTCAGCTTCGGGCTGATTCTGGTTCATTATCTCCTGTTGGATCAAGTGGCAATAACCTAGCATCTGATTTTCAAAAGATTGCCCTGGGTGAAGCTGCTACAGATAAAGGTAATTCAGACCCTATGTCAGAGGCCCTTGAAGGATTATCCCCAACAGATTCTTCCAGTCAATCTCAACTTTCAAATGATGATACTACAGGGAACACCAATTAA 1596 0.4818 MFTAPDSSSDNHSPTSAGDTNSPKFARKNLPSAWAQVVRGGECESRPSPPSSSSSSSSLTNCVPDQPPFSDFPQKEAPKSQVPDNSNAAGADASDANAGRSKRPAWSKPFNGVVEAGSVMGAVSWPALSKSTKVSTKISADSTSKTAFDGSLPTSQGSGTLQSPQKQPTNNAKPNSATNYAVHHRQRSMNRGGSNSIGVGHAQSSFSNPPPPPPPPPFPVFPIPVTSYGNVVPDHPPREIPYRNNNWDTRAPVGGFVPAVNDHWNPPRRGNFGPHQRGDGSYHNNHGNRRDQDRGNHANTRDAQAYQQRMSPRGLVRHPPPNTPAFVAPPPMGPFANPMGFPEFYYFPTLPLEPFRGMPFITHGPPPAMFLPAAETALTNMLMNQIDYYFSDANLVKDEFLKSNMDEQGWVPVALIANFRRVKSLTNNIQVILDSLRNSTVVEVQGDKLRRRHDWMKWLPSSQLRADSGSLSPVGSSGNNLASDFQKIALGEAATDKGNSDPMSEALEGLSPTDSSSQSQLSNDDTTGNTN 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0053 531 MobiDBLite consensus disorder prediction 1 109 - -
Lele25g0053 531 CDD LAM 380 453 - -
Lele25g0053 531 MobiDBLite consensus disorder prediction 128 176 - -
Lele25g0053 531 Gene3D - 372 462 IPR036388 -
Lele25g0053 531 SMART la 376 454 IPR006630 -
Lele25g0053 531 MobiDBLite consensus disorder prediction 492 531 - -
Lele25g0053 531 FunFam la-related protein 1B isoform X2 368 458 - -
Lele25g0053 531 MobiDBLite consensus disorder prediction 258 317 - -
Lele25g0053 531 MobiDBLite consensus disorder prediction 188 221 - -
Lele25g0053 531 MobiDBLite consensus disorder prediction 282 298 - -
Lele25g0053 531 MobiDBLite consensus disorder prediction 206 221 - -
Lele25g0053 531 MobiDBLite consensus disorder prediction 1 27 - -
Lele25g0053 531 Pfam La domain 383 438 IPR006630 -
Lele25g0053 531 SUPERFAMILY "Winged helix" DNA-binding domain 371 460 IPR036390 -
Lele25g0053 531 MobiDBLite consensus disorder prediction 46 67 - -
Lele25g0053 531 MobiDBLite consensus disorder prediction 188 205 - -
Lele25g0053 531 MobiDBLite consensus disorder prediction 509 531 - -
Lele25g0053 531 ProSiteProfiles La-type HTH domain profile. 372 461 IPR006630 -
Lele25g0053 531 MobiDBLite consensus disorder prediction 124 176 - -
Lele25g0053 531 PANTHER LUPUS LA PROTEIN-RELATED 122 463 IPR045180 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0053 Lele-ChrLele25 323386 327712 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0053 25 323386 327712 Lele27g2033 27 24391227 24395621 hybridization