Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0046 ATGGCTTCCCTCACCAATTTCGTCATCAAATCACCCTTCTCCCTCTCCACCCACCACTCCAAGCTCCTCCCGCTTCATTCCCGTTCTTCTTTACCTTTTCTGACGGCTCATACTCCTCCGCCAGCCGCCCTCAGAAACACCCACCACACCCGCTTCATCACAAGAGCCACGGCTGCCCCCGGCGCCAAGAAAGTTCAAAGCGACGAGAGAGTTCAAAAGGTCCACAGCATCGAAGAATTCGACCAAGCCCTTCGAACTGCCAAGGACAGACTGGTGGTGGTAGAATACGCGAGCAGGGACAGCGATGAGAGCAGCAAGATATACCCTTTCATGGTGGAACTGAGCCGATCGTGCGGCGACGTGGACTTCCTTCTGGTGATGGGCGATGAATCGGAGAAGACGAGAGAGCTGTGCAGGAGAGAAAAGGTGGATAAAGTGCCTCACTTTAGCTTCTACAAGAGCATGGAGAAGATACACGAGGAGGAAGGGATCGGTCCGGATCAGCTGATGGGAGACGTGTTATACTACGGAGATAACCACTCCGAGGTGGTACAGCTGCACAGCGGAGAGGATGTGAAGAAGCTGATAGAGGATCACAGGGCCGACCACAAGCTGATCGTCCTGGATGTTGGACTCAAGCACTGCGGGCCCTGCGTGAAGGTGTATCCGACGGTGTTGAAGCTGTCGAGGCAGATGTCTGACGCGGTGGTGTTTGCCAGGATGAACGGGGACGAGAACGACAGCTGCATGCGGTTCTTGAGGGACATGAACGTGGTGGAGGTGCCTACGTTTTTGTTCATCAGAGACGGTAAGATTAATGGAAGGTATGTGGGTTCTGGAAAAGGTGAACTTATTGGCGAAATCCTGAGGTACCAAGGGGTCCGTGTCACTTATTAG 897 0.5373 MASLTNFVIKSPFSLSTHHSKLLPLHSRSSLPFLTAHTPPPAALRNTHHTRFITRATAAPGAKKVQSDERVQKVHSIEEFDQALRTAKDRLVVVEYASRDSDESSKIYPFMVELSRSCGDVDFLLVMGDESEKTRELCRREKVDKVPHFSFYKSMEKIHEEEGIGPDQLMGDVLYYGDNHSEVVQLHSGEDVKKLIEDHRADHKLIVLDVGLKHCGPCVKVYPTVLKLSRQMSDAVVFARMNGDENDSCMRFLRDMNVVEVPTFLFIRDGKINGRYVGSGKGELIGEILRYQGVRVTY 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0046 298 Pfam Thioredoxin 202 283 IPR013766 -
Lele25g0046 298 ProSiteProfiles Thioredoxin domain profile. 159 294 IPR013766 -
Lele25g0046 298 SUPERFAMILY Thioredoxin-like 176 285 IPR036249 -
Lele25g0046 298 Gene3D Glutaredoxin 177 292 - -
Lele25g0046 298 SUPERFAMILY Thioredoxin-like 67 168 IPR036249 -
Lele25g0046 298 Gene3D Glutaredoxin 59 176 - -
Lele25g0046 298 CDD TRX_CDSP32 75 177 - -
Lele25g0046 298 PANTHER THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC 1 298 IPR044192 GO:0016671
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0046 Lele-ChrLele25 280538 281434 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0046 25 280538 281434 Lele27g2043 27 24431173 24434088 hybridization
Lele25g0046 25 280538 281434 Lele28g0054 28 309250 310146 hybridization