Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0038 ATGGCAGGACCTCAGTTGAAGCATGTTACGCCTACCGCCTCTCAGCACCTGCTCTCTGATGCCCCCGACGTTGCTCCCTCCAAGCTGGACGATACTGTCCAGAGTTTGCCTTCGAACGCCGTCAAGGACTTGTTGTCCCAAGAGTATGTTAGGCAGAGAACTAGACGGTTCCGAGCTTTCTATAGTTCTCAAGGAATAATGAAGGAATTTGTGATGACATGTGCTCGCTGCATCCTTCGGCTTTTTGGGGTCCAAGGCCACGTCTATTCATGCTCCTCGCTTTCATCATCAACCATTAGTTGTACTATTGGAGGATCAACTGATTTAGACAGAGATACGATGGATAGTTGTTTTAGAAAATGTGAAAACTCAAGTAGTTCGAAGGAACCCAAATGTGATGCTAAACTTTGTAGCCTTTGCTTAGGGATCCTGCAATTCAGATTTTCCTGTGACACAAGGACTCTATTGAAAGAGAATGCTCCTGATGCTATGGCTGTCTTAATTGCTGACATGGTTAGGGATGATGGCCATCAGATTAACAGCTTTTCACTTAAAGTTTCAGTCCCACCTGTTATCGTTGAAAATGAGAATGCAATTCAGTCATACATGAGAACGAAATATGGAGCTGAGCCTTGGTTCCAAGAAAAGTTGCATTTTGGATCTCTGTCTACAAAGGACGCATTAAAGTTTTCAATAGTTTATCCTCTTGAAAATCTTCTTGCAAGTGAATTATTGTATATATTCCAATTTCTAAGTGTGGACAACGGAGTGGGTGTTCCCTATGATTCCATGGTTTCTCACACTGAATATTCAGATTCTTTCAAATCTGAATCCAAACCAGTTGGAGAAAATCCTTTCAACAGTTTGCCAGAAAATGAGTCCTCTAAGTCCTGTGGAATGTTTCTAGAAAAGTATTCACGGAATGTGAGTCAAACACGCTGGATCATTGATGATGAAAGAATGGGGGAAGCATCTGTTGAGGTCCGAATGTTGGGTCCAGGCAGGCCGTTTCTTGTTGAGGTGCAAAATGCGCGACTGGTCCCATCTAATCTTTTTGTAAAGGATATAGAGAAATTGATAAATAGCTTGGAGAATAAATTGGTTAGCGTGAACAATATGGAGTTGTTTGGCAGCCATGGTTGGAATCTTATGCGTGAAGGAGAGGCAGAGAAACAGAAGCAATATGCTGCTTTAGTGTGGATTTCTCGTCCTCTGAACGATGAAGATTTTCAATCTGTGTCTTCACTCAAGGATTTGAAAATATTGCAGAGGACACCAATAAGAGTGTTACATCGTCGGAGTCCTTTAGAGCGTGAAAAGATTATTCACTGGATGAAAATAGAAACGGTTGCTGGAAATTCCCAGTATTTTCTTTTGCATTTGTGCACACAGGCTGGGACCTACATCAAGGAATTTGTTCATGGAGATCTTGGACGCACCCATCCTAGTATTGGATCAATTTTGGGCTTTAGAGCTGAAATTTTACAGCTTGATGTCACAAATGTCAAAATGGACTGTTTCCCTCCTTAG 1530 0.419 MAGPQLKHVTPTASQHLLSDAPDVAPSKLDDTVQSLPSNAVKDLLSQEYVRQRTRRFRAFYSSQGIMKEFVMTCARCILRLFGVQGHVYSCSSLSSSTISCTIGGSTDLDRDTMDSCFRKCENSSSSKEPKCDAKLCSLCLGILQFRFSCDTRTLLKENAPDAMAVLIADMVRDDGHQINSFSLKVSVPPVIVENENAIQSYMRTKYGAEPWFQEKLHFGSLSTKDALKFSIVYPLENLLASELLYIFQFLSVDNGVGVPYDSMVSHTEYSDSFKSESKPVGENPFNSLPENESSKSCGMFLEKYSRNVSQTRWIIDDERMGEASVEVRMLGPGRPFLVEVQNARLVPSNLFVKDIEKLINSLENKLVSVNNMELFGSHGWNLMREGEAEKQKQYAALVWISRPLNDEDFQSVSSLKDLKILQRTPIRVLHRRSPLEREKIIHWMKIETVAGNSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGFRAEILQLDVTNVKMDCFPP 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0038 509 Coils Coil 353 373 - -
Lele25g0038 509 FunFam tRNA pseudouridine synthase Pus10 393 503 - -
Lele25g0038 509 PANTHER UNCHARACTERIZED 65 242 IPR039894 -
Lele25g0038 509 Gene3D - 325 392 - -
Lele25g0038 509 Gene3D - 393 503 - -
Lele25g0038 509 SUPERFAMILY Pseudouridine synthase 389 503 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0038 Lele-ChrLele25 223891 228991 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0038 25 223891 228991 Lele28g0047 28 254949 263215 hybridization