Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0025 ATGTTTCTATCCCTATCTGGACTCGATTCAAATTCAGAATCCTTCGAACCGAGGATGTTTTTTGGTAGAGTTGGCCGCACTGAGCTGATTATCCTAGTAATGGGCTGTTGTGTATCTTCTTTTTCCAAGGATTATATTCCCCACAACATCCCTCATTTGGATAATCACAAGAACAACATCCTCAATCTTCCTTCTTCCTCCAACGGCGCCGATAGTACCGGTGATGCTGCTGACTTCCCGCCGTTCTTGGAGTTCTCCCTCGCCGACCTCAAAGCTGCCACCAACAACTTCAGCCCCGATCACATCGTCTCCGAGAGTGGCGAGAAAGCCCCCAATGTCGTCTTCAAAGGTCGTCTGCAGAACCAAAACCGCCGTTCTATTGCTGTCAAGAAATTCACTAAATTGGCCTGGCCCGACCCTAAACAGTTCGCGGAAGAGGCTTTCGGTGTCGGAAAATTAAGACACAAGAGGCTTGCCAATTTGATTGGTTATTGTTGTGATGGGGATGAGAGACTTCTCGTCGCAGAGTACATGCCTAACGATACCCTCGCCAAACATCTATTTCATTGGGAGAATCAGACAATTGAGTGGGCCATGCGGTTAAGAGTTGCCTTAAACATTGCTGAAGCATTAGATTATTGTCATGGAGAAGGCCATCCATTGTATCATGACTTGAATGCTTACAGAGTTCTCTTTGATGAGAACGGTGATCCCCGGCTTTCGTGTTTTGGTTTGATGAAGAATAGCAGGGATGGGAAAAGCTATAGTACAAATCTTGCTTATACGCCTCCTGAGTATTTGAGAAATGGGAGGGTGACCCCGGAAAGTGTCATCTTCAGCTTTGGAACTGTGTTATTGGATCTTCTAAGTGGAAAGCATATCCCGCCAAGTCATGCTCTCGATATGATAAGGGGCAAGAATATACTCATTCTTATGGATTCACATTTGGAGGGAAACTTTTTAACTGATGAAGCAACTGTGGTTTTAGATCTAGCCTCACAATGTTTGCAGTATGAACCTCGGGAGCGGCCCAAGACCAGGGACCTTGTTATCACACTCTCCCCACTACAAAATAAACCTGATGTTCCATCAAATGTGATGCTTGGAATTCCAAAGCAAGAGGAAGCATCTCCTACTCTGCAGCATCCTCTTTCTCCAATGGGTGATGCTTGTTCTCGAATGGACCTTACAGCTATCCATCAAATTCTGTTAATGGCACACTACAGAGATGATGAAGGGACCAATGAGTTATCTTTCCAAGAGTGGACCCAGCAAATGAGGGATATGTTGGAGGTAAGAAAGCGTGGTGACTTGGCTTTTCGTGACAAGGATTTTAAGATTGCGATGGAGTGTTACTCCCAGTTCATCGAGGTGGGAACAATGGTATCCCCAACAGTGTATGCTCGGAGGAGTCTTTGCCATCTGATGTGTGATCAACCAGATGCTGCTCTTAGAGATGCAATGCAAGCGCAATGTGTGTATCCTGAGTGGTCCACAGCATTTTACATGCAGGCCGTTGCTCTTTCCAAATTAAACATGGACAAGGATGCTACTGACATGCTCAATGAGGCTTCCGCCCTTGAAGACAAAAGACGGGGCAAAGGCTCTTCCTCTTGA 1617 0.4583 MFLSLSGLDSNSESFEPRMFFGRVGRTELIILVMGCCVSSFSKDYIPHNIPHLDNHKNNILNLPSSSNGADSTGDAADFPPFLEFSLADLKAATNNFSPDHIVSESGEKAPNVVFKGRLQNQNRRSIAVKKFTKLAWPDPKQFAEEAFGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALNIAEALDYCHGEGHPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILILMDSHLEGNFLTDEATVVLDLASQCLQYEPRERPKTRDLVITLSPLQNKPDVPSNVMLGIPKQEEASPTLQHPLSPMGDACSRMDLTAIHQILLMAHYRDDEGTNELSFQEWTQQMRDMLEVRKRGDLAFRDKDFKIAMECYSQFIEVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPEWSTAFYMQAVALSKLNMDKDATDMLNEASALEDKRRGKGSSS 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0025 538 ProSiteProfiles Protein kinase domain profile. 100 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0025 538 Gene3D Phosphorylase Kinase; domain 1 75 177 - -
Lele25g0025 538 FunFam probable serine/threonine-protein kinase At5g41260 179 370 - -
Lele25g0025 538 FunFam probable serine/threonine-protein kinase At4g35230 427 536 - -
Lele25g0025 538 Gene3D Tetratricopeptide repeat domain 427 534 IPR011990 GO:0005515
Lele25g0025 538 Pfam Protein kinase domain 114 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0025 538 Gene3D Transferase(Phosphotransferase) domain 1 179 370 - -
Lele25g0025 538 SUPERFAMILY TPR-like 431 528 IPR011990 GO:0005515
Lele25g0025 538 FunFam probable serine/threonine-protein kinase At4g35230 72 177 - -
Lele25g0025 538 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 66 532 IPR045845 GO:0004672|GO:0009742
Lele25g0025 538 SUPERFAMILY Protein kinase-like (PK-like) 80 361 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0025 Lele-ChrLele25 160967 166998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0025 85 361 Glycoside Hydrolase AT3G07070 34.539 6.33e-42 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele25g0025 Pkinase 1.2e-26 CL0016