Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0012 ATGAGTGCTAAGAACCCTAAAAATGTGTATCACATCGGAGGCCTCCAAGTGGAATTTCCTTACCAGCCATACGGTTCTCAGTTTGCATTTATGGGCAGAGTCATCTCTACCCTTAACCGGGCTCAGAGAGAAGGCCACTGTCACGCATTGCTTGAGTCTCCAACCGGTACTGGCAAGTCCCTTTCGCTTCTCTGTTCCTCCCTAGCTTGGCAGCAGTACTACAAGTTAAATAAACAGCACACAAATCTCTCTCACCTGAAGCCCCCTCCAGAAGCAACGACAGACCCTCTTGTTTACGGTGGTGGATTTGTTCCATACGAGGTTTCCCCGACATCAGAAAATATGGAGCTGCCAGAGACTGAGGCTAACAAGACGCAGAAGAAAAAGGCTGCGCCCACTATATATTATGCTTCGAGGACACACTCACAAATTTCTCAAGTAATTCGTGAATTGCGGAAAACATCTTATAGGGGGCCTATGGCTGTGCTGGCATCACGGAAACATTACTGTACCAATAAACATATACTAGCCAAAGACAATATTGATGAAGAATGTAAACTGCTTTTGAAAGATCAGGCAATAGGATGCCCAGAATTCAAAAATGCACATAAAGTCAAAAGTCACCCCTCCCTACAAAGAGGAGGATGTAATGAGGTGCATGATATAGAAGATCTTTTGAAAGTCGGACAAGCAGTGAAAGGTTGCTCCTATTATGCAGCTCGCTCTATGTCAGATGATGCGCAATTGGTATTTTGTCCTTATAGTTATATTATTAATCCAGTCATTCGGGGAGCAATGGATGTAGATATAAAAGGAGCCATTGTGATTCTGGATGAAGCCCACAATATAGAGGATATCACTCGTGATGCTGGTAGTGTGGATATTGAAGAGGATGTTTTGGATAAGCTGCAAATGGAGCTTCAGCAACTTTGTCCTGTCAATGCTCTGATATACCAACCATTGTATGAAATGGTGCAGGGTCTTACAAGCTGGATAGAACGCAGGAAAAATAAACTAGAAAAGCGTGATTTTCAGCACTATGTATCTTGTTGGACTGGGTCAAATGCTTTAACAGAACTCCAAGAAGCAAATATTTCAGTTCAGTGCTTCCCTATCTTGCTAGAATGCGCTACCAAGGCAATCAAAGTTGCTTCAGATTTGGAGTCGGATGTACCACATTTAAGTGGCATGTCAGTTATAACAATGGAAGGCTTATTCTCTTCGCTAACTTATTTCTTCTCAAGAAATGGTTCTCACATGCTGGACTACCAGCTTGCTCTGCAGCGAAGTGTTAAGAAAGAAGCTGGAAGATCTGTTGGAAATTGGACCCACACTTTGAGTTTATGGTGCCTGAATCCAGCAGTTGTGTTTAGTGACATTGCCAATCTTTCTTTATCAGTCATTTTGACTTCTGGGACATTGTCACCAATGAACTCCTTTTCATCTGAGCTAGGAGTTCAGTTTGAAACTAGTCTGGAAGCTCCGCATGTAATTAATGTTGACTCTCAGGTATGGCCTGCTATTATCTGTACCGGTCCAGGTAATTGTCCTTTGAATGCAAGTTATAAAACAGCAGATGGATATGGATTCCAGGATGCAGTTGGAAGATCTTTAGAGGAAATCTTCAAAATTGTTCCCGGTGGTTGTCTTGTTTTCTTTCCAAGTTATAAATTAATGGAGAAATTATGCAATCGGTGGTCCGAAACAGGTCAATGGTCTCGTCTAAATGTGGAAAAGTCACTTTTTGTCGAACCTAGAGGAGGGAGCCAAGATGATTTTGAACTTACTTTAAAAGGGTATTATGACTCAATTCATCTTCACACTACACCTACATTGGGCAGGAAAAGAAGGGTTAAGAATGTTGGCTTGAGTCACTTACATGCAGTCAATTCTCCAAAAAATTCTAAGAAAGGAGGAGCTGCTTTACTTGGCGTTTGTCGAGGAAAGGTTTCCGAAGGCATTGATTTTTCTGATGATAATGCTCGAGTGGTTATTATAGTCGGCATTCCATTTCCCAACATAAATGATATTCAAGTTGCACGAAAGAAGAAATACAACGACACATACAAATCATCAAAAAATCTTTTGAGTGGAAATGAATGGTATTGCCATCAAGCATTTCGAGCTTTGAATCAAGCAGCAGGTCGTTGTATACGGCATAGGCTTGATTATGGAGCAGTCATCTTATTGGATGAACGTTTTCAGGAAGAAAGAAATAGAGCATTCATTTCAAAGTGGTTAAGAAAAAGCTTAAGGATATATGAAAATTTTGACTTGTCTTTGAAGGGACTGAAATCATTCTTTGAGAATGCCAAGGAGCAGTTTGGCACAAATATCACTCAAAATTTGGGATTAAACCAGGAATGTGTCCAAGCCAAGGATCAGCATGTGGGATTTATGAGAAAGACAAATAAGAAACTGTTAAAGTCTGATAATGGTGGTGAGGGCAAAATAGAAATGATCAAGGATGAGATTCAGCCATCTGTACAAAAGAATAGTGACTCGTACAACTGTAAAGACTGGTTTGACCCAAAGGACTGCGAACAGGCAGTATCACGCTTCACTGGGGTATCATCTGCGACAGTTATACATGAAGAAGTCTCCCTTGTGAAGGAATCCCCTTGCATGGATGGCAACATTGTCCCTGCTAGCCCTGGTTATGGTTGTAAGGATGACCGCTCTAGCTCCACCTTAATTGAGGCATCTTCTGAATTAAATGATCAGTCAACCCTTCCATTTTCTTCAAGTATTGGAAGTAAAGCTTCTTCAACAGCTCAGTGTTTAATATCAGTTACTCCTGAAAAAAATGTAACTGCGAACGGCTATCATACTGTGGAAATAGAATCGTCTTTGAATAGGAGTGTTAATTCTCACACCCAGAAAAGGAGAAAGTCCATGGACATACCATTTATAAGCCTTATTGAGGAAGGAAATTACATCACCCCCTGTGCCAGCATCCCTTCAAGGCACACTGGAAGCTTGGTGAATCTCAAGGAGGCAACGAATGGAAATGAATCTGATTTTCACAAAAAATCGAAGTCAAATTCACTTCAATCACATCTTGTCAATCTGACTAGTTCACTTTTATTAACCGATCCTCTCATGGAGAAAAAGTTACAGATATTTTGCTCACTTTGCAAATCCCCTTTGGGTCGGCCTGAGAATAATTTATATATTACGTGTTCTTTGACTTCATCATCAAAAGTTCACTTAAGATCTCTTTTGAAACAGAGACTTAAAGCTTACAATGATGATGATTTAAGAAGTGTACCAGTTATTATAACTTGCATTTCGTATGTCGATCAACGCATCTGCAATAGGGTTAATGGAAGTGTTCCAGAGCAGGGTATTTGGTGCCCAGAAGATGGGTGTGTTTTCAGGTCTATGTTTTGCCCCTTCTGCCGTAAACCCAACAATTTGCTTGGAGTACATATCATGGCAACTGATGCATCAAATAGCTATTTACTTGACAAGATGTTGTTTTACTTCGATTTTTTGGAAGTTAAGAATCTCGAGGAATCAAGGAATGAGGTTTCAAAGAAAGCGGATTTGCTGCCAAATAGAGGCTCTGGTGTGGATTCTTTTGACAAATTTGCTGGACTTCCAGAACTTGAGAAGTCAAGAGTCTTGAAGACTAGAAAATCAAAGGTCAGATTTCAAGTAATTTCGTAG 3672 0.405 MSAKNPKNVYHIGGLQVEFPYQPYGSQFAFMGRVISTLNRAQREGHCHALLESPTGTGKSLSLLCSSLAWQQYYKLNKQHTNLSHLKPPPEATTDPLVYGGGFVPYEVSPTSENMELPETEANKTQKKKAAPTIYYASRTHSQISQVIRELRKTSYRGPMAVLASRKHYCTNKHILAKDNIDEECKLLLKDQAIGCPEFKNAHKVKSHPSLQRGGCNEVHDIEDLLKVGQAVKGCSYYAARSMSDDAQLVFCPYSYIINPVIRGAMDVDIKGAIVILDEAHNIEDITRDAGSVDIEEDVLDKLQMELQQLCPVNALIYQPLYEMVQGLTSWIERRKNKLEKRDFQHYVSCWTGSNALTELQEANISVQCFPILLECATKAIKVASDLESDVPHLSGMSVITMEGLFSSLTYFFSRNGSHMLDYQLALQRSVKKEAGRSVGNWTHTLSLWCLNPAVVFSDIANLSLSVILTSGTLSPMNSFSSELGVQFETSLEAPHVINVDSQVWPAIICTGPGNCPLNASYKTADGYGFQDAVGRSLEEIFKIVPGGCLVFFPSYKLMEKLCNRWSETGQWSRLNVEKSLFVEPRGGSQDDFELTLKGYYDSIHLHTTPTLGRKRRVKNVGLSHLHAVNSPKNSKKGGAALLGVCRGKVSEGIDFSDDNARVVIIVGIPFPNINDIQVARKKKYNDTYKSSKNLLSGNEWYCHQAFRALNQAAGRCIRHRLDYGAVILLDERFQEERNRAFISKWLRKSLRIYENFDLSLKGLKSFFENAKEQFGTNITQNLGLNQECVQAKDQHVGFMRKTNKKLLKSDNGGEGKIEMIKDEIQPSVQKNSDSYNCKDWFDPKDCEQAVSRFTGVSSATVIHEEVSLVKESPCMDGNIVPASPGYGCKDDRSSSTLIEASSELNDQSTLPFSSSIGSKASSTAQCLISVTPEKNVTANGYHTVEIESSLNRSVNSHTQKRRKSMDIPFISLIEEGNYITPCASIPSRHTGSLVNLKEATNGNESDFHKKSKSNSLQSHLVNLTSSLLLTDPLMEKKLQIFCSLCKSPLGRPENNLYITCSLTSSSKVHLRSLLKQRLKAYNDDDLRSVPVIITCISYVDQRICNRVNGSVPEQGIWCPEDGCVFRSMFCPFCRKPNNLLGVHIMATDASNSYLLDKMLFYFDFLEVKNLEESRNEVSKKADLLPNRGSGVDSFDKFAGLPELEKSRVLKTRKSKVRFQVIS 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0012 1223 FunFam Fanconi anemia group J protein homolog 515 762 - -
Lele25g0012 1223 FunFam Fanconi anemia group J protein-like isoform E 118 332 - -
Lele25g0012 1223 Gene3D - 23 327 IPR027417 -
Lele25g0012 1223 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 13 351 IPR014013 GO:0005524
Lele25g0012 1223 SMART Cxpdneu3 556 736 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Lele25g0012 1223 Gene3D - 515 761 IPR027417 -
Lele25g0012 1223 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 273 282 IPR002464 -
Lele25g0012 1223 CDD SF2_C_XPD 502 734 - -
Lele25g0012 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 730 IPR027417 -
Lele25g0012 1223 Pfam Helicase C-terminal domain 538 749 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Lele25g0012 1223 Pfam DEAD_2 136 299 IPR010614 GO:0003677|GO:0003678|GO:0005524
Lele25g0012 1223 SMART deadxpd 15 315 IPR006554 GO:0003678|GO:0016818
Lele25g0012 1223 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 12 770 IPR045028 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0012 Lele-ChrLele25 61266 73237 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0012 25 61266 73237 Lele27g2073 27 24627074 24648093 hybridization
Lele25g0012 25 61266 73237 Lele28g0019 28 90324 92093 hybridization