Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1918 ATGCAACGAACCAGAACGCGCGTGGAGTATTATGGCGATAATTACGTGAGAACTACTAAATATACACTAGCCTCGTTCCTCCCCAAGTCGTTATTCTTGCAATTTAGGAGGGTTGCTAACTTCTATTTTCTTGTATGTGCGATATTGTCCTTCTTCCCCGTTTCTCCCTATTCAGCTGTCAGCAATGTTGTTCCTCTGGTGGTTGTGGTTGCTGTAAGTATGGGCAAAGAAATGGTTGAAGACTGGAAACTCAAACAGAAGGATATTGATTATTCCCAATGGAGGGATATAAAAGTTGGGGACATGGTAAAGGTGGAAAAAGATGATTTTTTTCCTGCTGAACTCGTCTTACTTTCGTCGAGTTATGATGATGCTGTTTGCTATGTTGAGACCATGAATCTTGATGGAGAAACAAATCTTAAGTTGAAACAAGCGCTGGAAGAAACTTCCAAATTGCAAGAAGATTCAAGCTTTCAGGACTTCAGAGCTATGATCAAATGTGATGTTCCAAATGCAAATTTGAATACCGATTTTATCTATGGTGTGGTAATCTTTAAAGGTCATGACACAAAGGTTATGCAGAATTCAACAGCCCCTCCTTCAAAGAGAAGCAAAGTTGAGAAACGAACGGATAAGATAATCTACTTCCTGTTCTTTGTCTTATTCATTATTTCTCTTATTGGATGCATTTTCTTTGGAATTTCAACAAGGCAAGACCTTGAAAATGGAAGAACAAAAATATGGTACCTGAGACCAGACAATACTACGGTCTACTATGATCCAAATCGAGCAGCAGTCGCGGCAATTTTACATTTCTTGACCGCACTCATGTTACATGGTTACTTGATTCCCATTTCCTTGTATGTTTCGATAGAAATCGTGAAAGTTCTTCAGAGCATATTCATTAACCAAGATGCGAGCATGTATTATGAAGAAATTGACCAGCCAGCTCATGCTCGTACGTCGAATTTGAATGAAGAACTTGGCCAAGTTCGTAGCATACTTTCTGATAAAACAGGAACTTTAACCTGTAATTCTATGGAATTTATCAAGTGTTCCATTGCTGGGGTTTCTTATGGCCGCGGAGTTACAGAAGTTGAGAGAGCTCTAGCTAGAAGAAAAGGATATCCTTTAGTTCAAAATTCGATAGATGAGGATGATCAAGTTGCAGGAAAGCTATCTATCAAAGGATTTAACTTTGTAGATGAAAGGATTATGAACGGAAATTGGTTCAATGAGACTCATGCACATGAAATCCGGGACTTTCTGCGTTTGTTGGCTATCCTACAAACTCTGAACATAATAGAATTTAGCAGTGCAAGAAAGCGGATGTCTGTTATTGTTAGAGATGAGGAGGGAAAACTATTACTACTCTCCAAAGGTGCTGATAGTGTCATGTTTGAAAGACTTGGAAAGAATGGAAGGATGTTTGAGGAGAAGACTAAGAAGCATATTGATGAGTATGCAGATGCTGGTCTGAGGACGTTGTTACTTGCATATCGCACGCTTGATGAGGAAGAATGCAATCAATTTAACGAAGAATTCACGGAGGCCAAGAACTTGGTTAGTGCAGATCGGGAGCAGATTATAGAGGAAGTATCAGAAAAGATTGAGAAGGATTTTATCCTTCTTGGAGCTACTGCAGTTGAGGACAAATTTCAAAATGGGGTTCCTGAATGCATCGATAAGTTAGCACAAGTTGGAATTAAGCTATGGGTTCTGACCGGTTATAAGATGGAGACAGCAATCAACATTGGATTTGCTTGCAGCAATCAAGGCGAGTTTCTTCGTCAGATAAAGGATGGAAAGGCATTGCTTTCTAAGTCAGATGAAAACTCTGAGGCATTAGCTCTAATCCTCGACGGAAAGTCACTTGCTTACGCACTACAGCATGTGAAGGACTTGTTTCTGGAACTTGCATTTGGCTGTGCATCTGTTATGTGCTGTCGTTCGTCTCCCAAACAGAAAGCACTTGTTACAAGACTGTTCAATTCTAAAACTGGTAATACAACTCTTGCAATTGGTGATGGGGCAAACGATGTTGGAATGCCCAAGAGGCAGACATTGGAATTGGCGTCAGTGGGGTTGAAGGAATGCAGGAAATTTTTATGTACTGAAGGCCTGATAACTTTTTCACCTGAACCCTGCATCTTTTTATGGTTCTTGGATTCTCATTTTTCGTTTCATGTGCTACAGTTTCAGGCAGTTATGTCAAGTGACATTGCGATTGCCCAATTTCGGTTTCTCGAGTGCCTACTTCTCGTGCATGGACATTGTGTTACAGCAGGATGTCAAAAATGCTCATTCGTTCAACAGATTACAATTTATTTGGCTGTGACATACTTCTCCCCTGTTCTCCTGCAGATTTGCTACTTCTTTTACATGAATATTGCCTTCGGTTTTACTCTCTTGTTCTTTGAGGTGTATGCATCATTCTCAGGGCAAGCAGCCTATAATGATTGGTTCTTGTCACTATACAACGTATTCTTCACTTCGCTCCCTGTGATTGCCTTGGGAGTGTTTGACCAGGATGTCTCTGCCAGATTGTCTCAAGATAGCCCCCCAAACTCAATAACATTTCCATGGCATTCAGTTTGA 2598 0.4042 MQRTRTRVEYYGDNYVRTTKYTLASFLPKSLFLQFRRVANFYFLVCAILSFFPVSPYSAVSNVVPLVVVVAVSMGKEMVEDWKLKQKDIDYSQWRDIKVGDMVKVEKDDFFPAELVLLSSSYDDAVCYVETMNLDGETNLKLKQALEETSKLQEDSSFQDFRAMIKCDVPNANLNTDFIYGVVIFKGHDTKVMQNSTAPPSKRSKVEKRTDKIIYFLFFVLFIISLIGCIFFGISTRQDLENGRTKIWYLRPDNTTVYYDPNRAAVAAILHFLTALMLHGYLIPISLYVSIEIVKVLQSIFINQDASMYYEEIDQPAHARTSNLNEELGQVRSILSDKTGTLTCNSMEFIKCSIAGVSYGRGVTEVERALARRKGYPLVQNSIDEDDQVAGKLSIKGFNFVDERIMNGNWFNETHAHEIRDFLRLLAILQTLNIIEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERLGKNGRMFEEKTKKHIDEYADAGLRTLLLAYRTLDEEECNQFNEEFTEAKNLVSADREQIIEEVSEKIEKDFILLGATAVEDKFQNGVPECIDKLAQVGIKLWVLTGYKMETAINIGFACSNQGEFLRQIKDGKALLSKSDENSEALALILDGKSLAYALQHVKDLFLELAFGCASVMCCRSSPKQKALVTRLFNSKTGNTTLAIGDGANDVGMPKRQTLELASVGLKECRKFLCTEGLITFSPEPCIFLWFLDSHFSFHVLQFQAVMSSDIAIAQFRFLECLLLVHGHCVTAGCQKCSFVQQITIYLAVTYFSPVLLQICYFFYMNIAFGFTLLFFEVYASFSGQAAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARLSQDSPPNSITFPWHSV 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1918 865 CDD P-type_ATPase_APLT_Dnf-like 13 854 - -
Lele24g1918 865 Gene3D - 544 699 IPR023214 -
Lele24g1918 865 Pfam Phospholipid-translocating P-type ATPase C-terminal 789 854 IPR032630 -
Lele24g1918 865 Pfam Phospholipid-translocating P-type ATPase C-terminal 736 782 IPR032630 -
Lele24g1918 865 PRINTS P-type cation-transporting ATPase superfamily signature 674 693 - -
Lele24g1918 865 PRINTS P-type cation-transporting ATPase superfamily signature 567 577 - -
Lele24g1918 865 PRINTS P-type cation-transporting ATPase superfamily signature 335 349 - -
Lele24g1918 865 SUPERFAMILY Calcium ATPase, transduction domain A 91 195 IPR008250 -
Lele24g1918 865 SFLD C1.7: P-type atpase like 317 758 - -
Lele24g1918 865 Pfam Phospholipid-translocating ATPase N-terminal 8 61 IPR032631 -
Lele24g1918 865 SUPERFAMILY Calcium ATPase, transmembrane domain M 5 855 IPR023298 -
Lele24g1918 865 ProSitePatterns E1-E2 ATPases phosphorylation site. 337 343 IPR018303 -
Lele24g1918 865 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 425 512 IPR023299 GO:0000166
Lele24g1918 865 Gene3D - 73 198 - -
Lele24g1918 865 Pfam Cation transport ATPase (P-type) 430 471 - -
Lele24g1918 865 Gene3D - 398 543 IPR023299 GO:0000166
Lele24g1918 865 SFLD p-type atpase 317 758 IPR044492 -
Lele24g1918 865 SUPERFAMILY HAD-like 331 686 IPR036412 -
Lele24g1918 865 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 11 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1918 Lele-ChrLele24 23842920 23847003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1918 11 865 Primary Pumps ATPases AT3G25610 50.099 0.0 923