Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1915 ATGGCGAAGCTGAGCTTGGACATGCCCTCTGCTCGCACACCCACTCCCACTTCGCCTCCCTCACTCTCCTCTCTCCGACGTCCCTCTCTCTCTATTTCCCTCCCCACCTCCACCACCATCTCTCTTCTGGCTCTCTTCCCTCTTCCCTCTGACGCCAAGGCTGTCTCCATCTCCAAGGACCAGATTGTCTCTTCTCTCACCCAAGTGGAGCAAACCATCGATCAAGTTCAGGAGGCGGGTTCAGGTTTCTTCCTAACCAGCCAGAGCCTTCTTCAAGCTCTCGCCGATGCTCTGAAGCCTACCCTTGACTCCGCCTTACCCGTTGTCCGCCAGGCGGCACAGGAGGCTTTCGAAGTTGCTTCCCCGGCCATCTCCGAGGCTTCCAAAACGGCTCAACAGGCACTTCAAAGCTCCGGTCTTGATACTCAACCTGTTCTCTCTGCCGCCAAGACCGTAGCAGATGCCGCGCAACAAACAGGCAAGGTTATTGAAGACGCCAAGCCAATAGCTTCAACAACCGTCGAAACTATATCTTCTGCAGATCCTACTGTAATAGCCGGAACAGCCGGAGCAATATTTATTGCTTATCTCCTGCTACCTCCTATCTGGTCTCTCGTCTCTTTTAACCTTCGTGGTTACAAAGGTGAGCTTACTCCTGCTCAAACCCTCGATCTTTTGTGTACTCAGAACTACATTATGGTTGATATTAGGTCAGAGAAGGATAAGAACAAGGCCGGTATTCCTCGCCTTCCCTCTAACGGCAAAAACAAGATGATTGCCATACCATTAGAAGAACTGCCGAGTAAGCTGAGAGGGCTGGTGAGAAATGCGAAGAAAGTAGAAGCTGAAATAGCAGCTCTGAAGATTTCATATCTCAAGAAAGTAAACAAAGGCACCAACATTGTGATCATGGACTCGTACACGGACTCAGCAAAAATAGTTGCAAGAACGCTGACGAGCCTGGGGTTCAAGAAGTGCTATATTGTGGCGGATGGGTTTTCTGGGAACAAAGGGTGGCTACAGAGTAGATTAGGAACAGATTCATACAATTTATCGTTTGCAGAGGTACTGTCACCGTCGACAGTGATCCCTGCCGCGGTGAGCCGCTTTGGGACGACCAGCGGAAAACTTCTTCCTGAATAG 1143 0.5048 MAKLSLDMPSARTPTPTSPPSLSSLRRPSLSISLPTSTTISLLALFPLPSDAKAVSISKDQIVSSLTQVEQTIDQVQEAGSGFFLTSQSLLQALADALKPTLDSALPVVRQAAQEAFEVASPAISEASKTAQQALQSSGLDTQPVLSAAKTVADAAQQTGKVIEDAKPIASTTVETISSADPTVIAGTAGAIFIAYLLLPPIWSLVSFNLRGYKGELTPAQTLDLLCTQNYIMVDIRSEKDKNKAGIPRLPSNGKNKMIAIPLEELPSKLRGLVRNAKKVEAEIAALKISYLKKVNKGTNIVIMDSYTDSAKIVARTLTSLGFKKCYIVADGFSGNKGWLQSRLGTDSYNLSFAEVLSPSTVIPAAVSRFGTTSGKLLPE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1915 380 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 47 346 IPR044690 GO:0009704|GO:0071277|GO:0090333
Lele24g1915 380 CDD RHOD 221 335 - -
Lele24g1915 380 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 193 335 IPR036873 -
Lele24g1915 380 MobiDBLite consensus disorder prediction 1 27 - -
Lele24g1915 380 Gene3D - 214 353 IPR036873 -
Lele24g1915 380 Coils Coil 270 290 - -
Lele24g1915 380 ProSiteProfiles Rhodanese domain profile. 227 348 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1915 Lele-ChrLele24 23823843 23825674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1915 24 306 Sulfurtransferasese or Rhodanese AT5G23060 70.526 1.33e-144 410
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1915 24 23823843 23825674 Lele24g1915 24 23823843 23825674 ECH
Lele21g1998 21 26882162 26883938 Lele24g1915 24 23823843 23825674 hybridization
Lele22g1965 22 24260026 24261876 Lele24g1915 24 23823843 23825674 hybridization