Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1901 ATGGAGGGGAACACAACCTTGGAGCAACAGCATCTTCACCATCCTTGTCCTTCTCAGAAACCCATTCTGACCTCAAGCTTACTCAACATGGAAACTGGGGAAGGCCATGAATTTTCTCATGTCTTAGGTCATGGTCAAGGTTTACACTATATTCCATTTTACTACTCTCAGTTACCCCTTCCCAACAACCCAGTTCTGTTTATAGACCATAAACCCTCTCCAAACACTTCATCTAACAGCAACAACAATGACAACATCAATAATTGTGGCGAAGGGAAGGTTGTTGCTGATGAGAGAAAGAAGAAAAGGATGTTCTCCAACAGAGAATCTGCTCGTAGGTCGAGGATGAGGAAGAAGCAGCAGATAGAGAACCTTCAGTATCAAGTGGATCATCTTCAGACCATGAACCATCAACTTTCGCAGAAGATAATTTATTTGTTGGAATGTAACCAGCAGATTCTCCAGCAGAACGGTCAACTCAAAGAGAAAATTTCTACACTTCAAATGGCTCTCTCTGACTTGTTAGTTCCTCTGCCTCGTGATGACGATGCTAATCATATCCACAATGCCCTCATCGCCGAGCCTTCTGCTCCACCAGTTGCTAGTTCCGAAGCATAG 618 0.4369 MEGNTTLEQQHLHHPCPSQKPILTSSLLNMETGEGHEFSHVLGHGQGLHYIPFYYSQLPLPNNPVLFIDHKPSPNTSSNSNNNDNINNCGEGKVVADERKKKRMFSNRESARRSRMRKKQQIENLQYQVDHLQTMNHQLSQKIIYLLECNQQILQQNGQLKEKISTLQMALSDLLVPLPRDDDANHIHNALIAEPSAPPVASSEA 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1901 205 MobiDBLite consensus disorder prediction 71 89 - -
Lele24g1901 205 FunFam BZIP transcription factor 97 151 - -
Lele24g1901 205 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 97 146 IPR004827 GO:0003700|GO:0006355
Lele24g1901 205 CDD bZIP_plant_GBF1 100 148 IPR045314 GO:0003700|GO:0006355
Lele24g1901 205 Gene3D - 97 151 - -
Lele24g1901 205 MobiDBLite consensus disorder prediction 71 92 - -
Lele24g1901 205 Pfam bZIP transcription factor 99 157 IPR004827 GO:0003700|GO:0006355
Lele24g1901 205 SMART brlzneu 95 159 IPR004827 GO:0003700|GO:0006355
Lele24g1901 205 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 102 117 IPR004827 GO:0003700|GO:0006355
Lele24g1901 205 Coils Coil 108 142 - -
Lele24g1901 205 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 70 182 IPR044521 -
Lele24g1901 205 SUPERFAMILY Leucine zipper domain 99 155 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1901 Lele-ChrLele24 23738985 23739602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1901 97 203 bZIP Transcription Factor Family AT5G60830 50.442 7.21e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele24g1901 bZIP_1 8.2e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1950 22 24178417 24179034 Lele24g1901 24 23738985 23739602 hybridization