Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1900 ATGGCAGATGTCACCTACCTTCGCCACCGCGAACCCGACGACGATCCTCACCTTCCTGACCGGACCCTAGCTCTTGATTCTATCCCCCACTGGTCCCACGCCGATTCCGATTTCGACTTCTATCCTTCAGATTCCGAATTCCCGCCTCCCGATACCCCTCTCCGCCCTCACAACGCTCCTCGCGATCGTGCCTTGTCTCACCAGTTTGAATCCACCATCTCTCTACGAGGTGACGATAACTTCTCGGACCCTGGTTCGATTCCCAGCACCGATCTACTGGACCGCGAAAACCAGGTAAATTTCGTTATGGATTTGTTTCAGCAGCGTATTGAGCAATCGCAGGTCATGGGTCACAGCGATTTGGTCTCCGAAGTCATGGATAATTCTAATTTCGGTATTATTGACGGTCATTGCGACGTGGGTGTTGATGATATGGGTATGGATTTTGGATTTGGCTTGGATAGGGATTCTTTCCAGGGTGATGATATTAGTGGCTTTATAGTTGAAAATTATGGTTCTGGTGGTGGAGATGGTAACCATTTTTTCGTAGGAAGGAGGGTTTCTGGATCTGAGTCCGTGGGGGCACCCTCTACGGCAAGCCAAATTCGGCCTTTTGACAACTGTTTACGTCTCGTGGAGTTCGGGTCAGATTGTGCTGAGGAGGAGGAGGATGGGGCTTTGGGCGTGCGCGTGCATTCGGAAGATGAATACAATTTGCATGACGCGAACGACGACGTTTCCAGCATCCCGCTTTGCTGGGATTCATTACAATTGGAGGATGATAGGGAGAATACTGAAGATTTTGAGTGGGAAGAAGTCGATGGTCGGGTTGATGAGAGGGAAGTTTTGAGCATGCTCACCGGTGAGGATGATGTGTCCATATCAGTTTCAGTTTCCCCAATAAATGGGCTTGAAGAAGAGGTAAGTGTTATGAGAGCGGGAGGTGTGGAAAATTTGGGTTGGGAAGTGTTGCTGAATGCCAATAATTTGGACACGAACCCTGATCTGGATCACGATGCAGAACCTTATTTTGGGGATCATGATGACTATATTTATACTGCAGAGTACGAAATGATGTTTGGCCAATTCGCTGACAATGAGAATCCCTTGGTTGGTCGGCCTCCAGCTTCCGTATCAGTTGTTTGGAATCTTCCATCAGTGATTTTGACCAAACATGATATCGAGAACAATGGTGCACTTTGTGCAGTTTGTAAGGACGAGTTCAATGTTGAAGAACAAGCGAAGCAATTGCCATGTTCACATTTCTACCATGGAGAATGTATTGCCCCGTGGTTGGGAATTCGGAACACTTGTCCTGTTTGTCGATATGAGTTGACTACTGATGATGCTGATTATGAGCGTAGGAGGATGCGAAGATCTGGCCGTAGCTCGTGA 1395 0.4796 MADVTYLRHREPDDDPHLPDRTLALDSIPHWSHADSDFDFYPSDSEFPPPDTPLRPHNAPRDRALSHQFESTISLRGDDNFSDPGSIPSTDLLDRENQVNFVMDLFQQRIEQSQVMGHSDLVSEVMDNSNFGIIDGHCDVGVDDMGMDFGFGLDRDSFQGDDISGFIVENYGSGGGDGNHFFVGRRVSGSESVGAPSTASQIRPFDNCLRLVEFGSDCAEEEEDGALGVRVHSEDEYNLHDANDDVSSIPLCWDSLQLEDDRENTEDFEWEEVDGRVDEREVLSMLTGEDDVSISVSVSPINGLEEEVSVMRAGGVENLGWEVLLNANNLDTNPDLDHDAEPYFGDHDDYIYTAEYEMMFGQFADNENPLVGRPPASVSVVWNLPSVILTKHDIENNGALCAVCKDEFNVEEQAKQLPCSHFYHGECIAPWLGIRNTCPVCRYELTTDDADYERRRMRRSGRSS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1900 464 Pfam Ring finger domain 401 442 IPR001841 -
Lele24g1900 464 ProSiteProfiles Zinc finger RING-type profile. 401 442 IPR001841 -
Lele24g1900 464 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 279 445 - -
Lele24g1900 464 SMART ring_2 401 441 IPR001841 -
Lele24g1900 464 SUPERFAMILY RING/U-box 386 448 - -
Lele24g1900 464 MobiDBLite consensus disorder prediction 1 21 - -
Lele24g1900 464 FunFam E3 ubiquitin-protein ligase RING1-like 362 448 - -
Lele24g1900 464 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 363 448 IPR013083 -
Lele24g1900 464 CDD RING-H2_RNF126_like 401 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1900 Lele-ChrLele24 23735645 23737039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1900 1 448 C3H Transcription Factor Family AT5G60820 35.565 7.54e-60 200