Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1886 ATGGAGTCTTGGAGATACGGTTCTGGGGATAAGGGTTTTGTGCCAAATAATAAACTCCCACCTCCTAATACGCTTGCGAGAAGCAAAAATTCCTTCCCTGGTTGGGAATTGAAAGCCCAATCTAATTTTTCCAACTACATTTTGGCGTCGGCTCAACATCATTTAGAGGGTGAAGTTTATGACGAAATGGGATTTCCAGAAATGTTGGGGAAACAGTTGTCTAATTATCCGCTTGGCTGTATTATGAATGATCCAAATTCATTTTCTGGAGGCGAAGACTCTGCTTCAAAGATTTTAAACTCTGTGGTTGAATCTAACAGCCGGGATTCCTTCATTGATTTGAAGTTAGGAAGAGTTGGTGATCAAAAAGATGCCAATGAATCGCCATTCTCCAAAGGTATTCCTCTTTTGTGTTCTTCAGAGTCATCTACGACCCCAAAGAGAGTGAGAACTTCAGGGGTTCAGCCACAGACTGCTTACTGCCGAGTTTATGGCTGCAACAAGGATCTAAGCGCCTCTAAAGACTACCACAAGAGGCACAAAGTTTGCGAGATTCATTCCAAGACAGCTAAAGTCATTGTGAATGGCATAGAGCAAAGGTTTTGTCAACAATGTAGCAGGAACAAACCTGACCTAATCATTGGTGGACACTACTACTTCTCGTCAAATATAAAGTTTCATTTGCTGGCTGAATTTGATGATGCCAAGCGCAGCTGTCGCAAACGCCTTGCAGGCCATAATGAGCGACGAAGAAAGCCACAAATGGGTACTCACTCTGGAAAGGGGAGGAGGTTGCTTCAGTCATATAATGAAGGCAGATTCCAGGGTAGCATGCTAACAGCAGCATCTTTTGGCATTCTGCATTCTGACAAGTATGGGGCTGATAACTGGTGGAAACCTATAAAGGTTCAAGGTGGGAATGATTTTAGGCATATCTCTGCTATTCCTCTCACAAATGGGCATTCTCAGACATCTTCTTAG 981 0.4312 MESWRYGSGDKGFVPNNKLPPPNTLARSKNSFPGWELKAQSNFSNYILASAQHHLEGEVYDEMGFPEMLGKQLSNYPLGCIMNDPNSFSGGEDSASKILNSVVESNSRDSFIDLKLGRVGDQKDANESPFSKGIPLLCSSESSTTPKRVRTSGVQPQTAYCRVYGCNKDLSASKDYHKRHKVCEIHSKTAKVIVNGIEQRFCQQCSRNKPDLIIGGHYYFSSNIKFHLLAEFDDAKRSCRKRLAGHNERRRKPQMGTHSGKGRRLLQSYNEGRFQGSMLTAASFGILHSDKYGADNWWKPIKVQGGNDFRHISAIPLTNGHSQTSS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1886 326 MobiDBLite consensus disorder prediction 243 264 - -
Lele24g1886 326 Gene3D - 152 240 IPR036893 GO:0003677|GO:0005634
Lele24g1886 326 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 88 277 IPR044817 GO:0003677
Lele24g1886 326 ProSiteProfiles Zinc finger SBP-type profile. 158 253 IPR004333 GO:0003677
Lele24g1886 326 MobiDBLite consensus disorder prediction 1 27 - -
Lele24g1886 326 SUPERFAMILY SBT domain 159 257 IPR036893 GO:0003677|GO:0005634
Lele24g1886 326 Pfam SBP domain 161 208 IPR004333 GO:0003677
Lele24g1886 326 Pfam SBP domain 225 252 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1886 Lele-ChrLele24 23635139 23637691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1886 1 268 SBP-box Gene Family AT1G69170 37.313 2.95e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele24g1886 SBP 7.6e-17 No_clan