Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1880 ATGGGCTCAACAAGTGAAACAGCTCCTCTCTTAGAGCGCAACGAAGGAGGAAAGAGCAACAGTGCCTCATTGAATGAACTGACATACCTTGAACGTGGTGATGCAGTAGCAAATGTGGGATTTGGTTGGGTTCTTTCACTTGCAAAGCCTGAAGCTGGGAAGCTTATATTCGCAACACTTGCTCTTTTAATGGCATCCACATCAGATATTTTAATTGTATGTGTCACAATTATTGGACTCTCTCTCTCTCACACACACACACGAAGCCATGAGATATTCAAACTCCCAAAGATAAAGCTAAAGCTTTGGAACTTGGAAGCTGTCAAGATCACTATACTGTACATTTTTCTGATTGTTGTTGTTGGAGCAGTTTCAACAGCACTTGATGGTTGGCCTTTTTCCTCAGCTAGTGAAAGGGTTGTTGCTCGGCTTAGAGAAAGATTATTTAGTCACCTCATAATCCAGGAGATAGCCTTCTTTGATGTTACCCGTACTGGGGAACTTATGAGCAGGATATCTGAAGATACACAGATCATAGAAAATGCAGCAACTACCAATCTTTCTCATGCGCTGAGTAGCTTATTGACTGCATTTATTGGTCTTTGCTTCATGTTTCTTGACGTCATGAATAATCAACATAACTATTGTTTACCCTCGATTTTCTTCACCATTGAACCACTTCCAGTGTTGGCTTTAGCTGTTGTGCCTGCTACTTTTATAGTTGCACGTAAATTTGGTTGGTTCCTATGTGAACTTTCTCAGAAAACACAAGATGCAGCTGCCGCAGCTGCTTCAATAGCTGAGGAATCCTTTGGTGTCATAAGGACGGTAAGATCTTTCGCCCAAGAAGAATATGAAATATCTCGCTACTCTAAGAAAGTTGATGATGGGACACTTTATCTTGGACTTAAACAAGCTAAAGTTGACGGACTCTTTTCTGGAGGCATTTATACAGCAATTTCACTGCCAATTATTGTAGTTGTTATCCGTGGGGCTTATTTGACAATTACAGATTCCATGTTCCCCGGTGATCTGACGTCTTTCATTCTTTATAGTCTCACAGTGGGACCTTCTATAGCTGGTCTCTCAGGCTCGTATACCATAGCTATGAAAGCTGTGGGCGCAAGCAGACGGGTGTTTCACCTTCTTGATCGTGTATCATCAATATGCCAATGTCGGGAAATAAATGTCCTCTGGGAACAAGATGGTGATGTGGAGCTAGATGATGTCTGGTTTGCATATCCATTTCGTCCCAGTCATATAGTACTTGAGTTAGCAGTTTCCTTCTTGTTCTCTGTTCTAGTGGGAATTACAATGCAATTGGATCCTGGCTCAAAGCTTGCTCTTGTTGGTCCAAGTGGTGGTGTTGGAAAGACTACAATAGCAAACTTAATTGAAAGATTTTATGACCCAACCAAGGGAAAGATCCTGTTGAATGGGGTTCCACGGGTAGAAGTATCACATGAGCATCTGCACAAGAAGGAGCCTGTACTTTTCAACTGTTCCATTGAGGAGAACATAGCTTATGGATTTGATGGCAAAGTTAATCCTGCTGATACAGAATTTCTTAACTCTCGATCCCTCATAATTGGATGCCATGGAACGTCTGATGAAGGGAAGGACAGTTCTAGTATGAGATCACCGCATCCTCTCTCGCTAGTCGCTACTACTGTTCGACTTAATCGTTCTTCTGCCATTGTTATCTTGGTTTTCTGTTTTCGTTTGGATTTGTTTTTATGGAAGCATGATCATTCTAAGGTATCACATTTTTCACTTGGTAGAGCCATATCAAGCAACTCAGAAAAGAAGCTTCTTGTACTTGACATTAATGGGCTACTTGCTGACTTTGTCCTTGGTGTTCCTGAGGGATATAAACCAGACAGAATGATACAAAACAAAGCAGTTTTCAAGAGGCCTTTTTGTGATGATTTTCTGCAGTTCTGTTTTGACAAATTTCGTGTTGGTATTTGGTCATCAAGAAAACGGGTAAACGTTAATGCTGCAATCAAACTTCTTGTGGGGGTTTCAGCATCCAAACTGCTTTTTGTCTGGGATCAAGGACGCTGTACTATGACAAAATTCAAGACCATCGAGGACAAACACAAGCCCATTATGTTGAAGGAACTTAGGAAGTTGTGGGAAAGGTGTAGACCTGAGCTTCCGTGGAATAAGGGAGAGTTCAACGAAACAAACACTTTGTTGTTGGATGACTCCCCTTACAAAGCAATACGGAATCCAATGCACACGGCAATATTTCCTTATTCTTACCGGTACAACGATGCCAATGACACAGCTTTAGGACCTGGAGGTGATCTTCGTGTTTATCTTGAAGGATTGGCTATGGCTGAGAATGTTCAGGAGTACGTGGCTTCTCATCCATTTGGTCAACCACCCATAACAGAATCAAGCCCACACTGGCAATTTTATTGTGAAGTTAAGAGATCGAGGGCAATAGGAAGAAACAGAAAACGGAGATAA 2478 0.4165 MGSTSETAPLLERNEGGKSNSASLNELTYLERGDAVANVGFGWVLSLAKPEAGKLIFATLALLMASTSDILIVCVTIIGLSLSHTHTRSHEIFKLPKIKLKLWNLEAVKITILYIFLIVVVGAVSTALDGWPFSSASERVVARLRERLFSHLIIQEIAFFDVTRTGELMSRISEDTQIIENAATTNLSHALSSLLTAFIGLCFMFLDVMNNQHNYCLPSIFFTIEPLPVLALAVVPATFIVARKFGWFLCELSQKTQDAAAAAASIAEESFGVIRTVRSFAQEEYEISRYSKKVDDGTLYLGLKQAKVDGLFSGGIYTAISLPIIVVVIRGAYLTITDSMFPGDLTSFILYSLTVGPSIAGLSGSYTIAMKAVGASRRVFHLLDRVSSICQCREINVLWEQDGDVELDDVWFAYPFRPSHIVLELAVSFLFSVLVGITMQLDPGSKLALVGPSGGVGKTTIANLIERFYDPTKGKILLNGVPRVEVSHEHLHKKEPVLFNCSIEENIAYGFDGKVNPADTEFLNSRSLIIGCHGTSDEGKDSSSMRSPHPLSLVATTVRLNRSSAIVILVFCFRLDLFLWKHDHSKVSHFSLGRAISSNSEKKLLVLDINGLLADFVLGVPEGYKPDRMIQNKAVFKRPFCDDFLQFCFDKFRVGIWSSRKRVNVNAAIKLLVGVSASKLLFVWDQGRCTMTKFKTIEDKHKPIMLKELRKLWERCRPELPWNKGEFNETNTLLLDDSPYKAIRNPMHTAIFPYSYRYNDANDTALGPGGDLRVYLEGLAMAENVQEYVASHPFGQPPITESSPHWQFYCEVKRSRAIGRNRKRR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1880 825 SMART forpap2 601 763 IPR004274 -
Lele24g1880 825 Pfam ABC transporter 436 498 IPR003439 GO:0005524
Lele24g1880 825 ProSiteProfiles FCP1 homology domain profile. 598 779 IPR004274 -
Lele24g1880 825 FunFam Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 567 795 - -
Lele24g1880 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 518 IPR027417 -
Lele24g1880 825 Gene3D ABC transporter type 1, transmembrane domain 40 391 IPR036640 GO:0005524|GO:0016020
Lele24g1880 825 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 31 512 - -
Lele24g1880 825 Gene3D - 399 528 IPR027417 -
Lele24g1880 825 SUPERFAMILY ABC transporter transmembrane region 43 384 IPR036640 GO:0005524|GO:0016020
Lele24g1880 825 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 405 682 IPR003439 GO:0005524
Lele24g1880 825 Pfam ABC transporter transmembrane region 57 354 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele24g1880 825 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 55 371 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele24g1880 825 Gene3D - 580 793 IPR023214 -
Lele24g1880 825 FunFam ABC transporter B family member 25 115 401 - -
Lele24g1880 825 Pfam NLI interacting factor-like phosphatase 603 786 IPR004274 -
Lele24g1880 825 SUPERFAMILY HAD-like 599 789 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1880 Lele-ChrLele24 23590069 23602602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1880 138 512 Calmodulin-binding Proteins AT2G36910 23.846 1.51e-17 85.9