Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1879 ATGGCCGCAAAGCTCCTGCACTCTTTAGCTGATGACAACCCTGATTTACAGAAGCAGATTGGATGCATGACCGGGATTTTCCAACTTTTTGATCGGCATCATGTTCTTACGGCTCGACGGATTAACCAGAAGAGGCTTCCTCCTGCTAATCGTTCAAGGGGAAATCCTCACTTTGGTGATGGCATCTTTGAAAAAGATTCTAGTAACGCAAGCCAGCAGCAAATAGCTTCTAATTTATTGCAGGATGTGAGCTCGAACAAGGGAGTTGGTGAGAAACAAAGGATATCCACAGAGTCATCAAGAGCCTCTTTCTCATCTTCATGTTCATCATCCCTGTCCTCTCTGGATTGCAGAGCTCAAGTGGAGGGTTCCTTTGATCGCATTATTTATCCTGAAATTCCTTCAAGGGAACCAGTTATGAACCAAACAACTGCCTCTCCCCATTTAGGACCGCAATCCCTTGACCTGAGGGGTGTGGTGAAGGATTCTATGTATAGGGAGGCCAGAGGACTAATGATAAAGAAGCCTATAGCTGAAGAAGAAGCTGCCTTTCATGCTATGAAACACAGGGACTCCCCAAGACCACTTCAGCTGTCTAAATCTGTTGATGGATCTTGTGGAGTTGGAATTGATGGGAAGCAAAGTGTGCCTGTTGATGTAAAAGAGTCTCTCAGAGTTCTAGCTAAACTTAGAGAAGCACCATGGTATTATGGTGAAGCTAGAGAAATTCCAAGATCATCAAGTGAAGTTAAAGATGGACACTGGCATTTGATCTCAAAAGATGCTCCTCGGTTTTCTTATGATGGGAGAGAAATAAGTCGTCTATCTTTTGAATCAAGGGATACAATCAAAGGCCCACAAAAGCTAAAAGAACTTCCTAGACTTTCATTGGACAGTAGGGAAGGCTCATGGTGCACTTATAGCTCTGATCTAAAACCCAATCACCTATCAAGGGGCCTTGGCAGAGGCAACACCATATCAGATGATAAAATGTGCAGTTTACCACAGTCTGCAGCAACCCAGAGGCGGCCTCCTAGTGTTGTAGCAAAATTGATGGGCTTGGAAGCATTGCCTGATTCCTATATGGCTGTTGATACTCCGTTGAATTTGAGAGGAAATCTTTCAGCTCAACATGATAATCAGTTTCCAAAATCATCAAAAACTGAACTGATCAAGCCACTCAAAGTTTTTAATTCCTCAAAAGGCTCATTGAAAGACCCAACTTCGCCACGGCGAAAGAACCCTGATTTGGTTATGAAACCTATTTCAAGTTCGAGATTTCCAATTGAACCAGCACCTTGGAAACAGCAGGATGTAAATCGGAGCTCTCAGAAATCAAGTTTGAATGCCATGAAAGCTCCAGCAAGAACACCAGATTCATTTCCTTCAGTTTATAGTGAAATTGAGAAGAGATTGAAGGATCTTGAGTTCAAACAATCTGGAAGGGACCTCCGAGCACTCAAACAGATACTGGAAGCAATGCAAGCAAAAGGATTGTTAGAGACCAGAGAAGAAGAACAAGCTGTAGATGATGGAAGTCAAAGAGACAATGGAACAAATACTGTGAATCTGATTCAGAACCCTAGATCAGTAAGGCAACAAAACGCACATAGCAATAATTTTCTGTCATCCTCAAGGAGGGTAGCAGACTCTACGAGGGCTTGTGAATCACCAATTGTGGTCATGAAACCAGCAAGGCTTGTTGATAAAACTGGAATTTCTGCTTCCTCAGCAATTCCTGTTGGTGGACTTTCGGGTTTCCATAAACTTGACAGTCTTGCAAATGAAGATAAGAAAAGAAGTTCAGCTTCCAGTCGAATATCACAAGATCACTCACCTAAAAACAGTCGTAGGGATGGTACTGCCAGTTCCAATGTTTGGAAAGCTGGTAGTGGTAAGACTATAAAATCTGCACAATCTCAACCTAGGTCTCAACAATTTTCAAAAGAAAAGAGCTCAAGTTCAGTAACGAACTCAGGATCTGTGAGCCCTAGAATGCAACAGAAGAAGCTAGAGTTTGAGAGGCGATCTTGTCCACAAACTCCACCATCAGATTCAAATAAAACCAGAAGGAAATACAGTAAACAAGCAACAGATTCAGGTTCTCTAGGTGGAAAACTGCGACCAAAATCCCCTTTCTCACAGCACACTGACAACCCACTGAGTCTGATAAGAAATGAAACAAGAACGTCAAGTTGCCAAAAGGATGAAATATTTGTGGAATCTGACAGTATTACTGTCTCAGACTCTAATGTGGACATGGAAGTCAGCAGCAGTTTACATTTGTCTCAAACTAATGATATCCCGAGCCCTTCCATGAAAACTATGAAGCAGCCAATTTCAGGACCAATGCAGAAGGAACCAATTCAGAGGTTGGATGAGGATGAGTCAATTGCCGATATTGCAATAAATTCCCAAGAACATCCAAGCCCTGTCTCGGTCCTTGATGGCTCTGTTTACAGAGATAATGAGCCTTCTCCTGTAAAGCAGATTGCTGATACTCCCAAAGCTGATGGTGCCCAAGAGTATAATGGAAATGAGAATGAAGATTGGTGGGATCCTGTGGATAAATTAGTTAACAGGGAAGGATTTGGAGAGATCAATCGCAAGAAACTGCAGAGCATAGATCATCTTGTTCATAAGCTTAGACGGGTGAATTCCAGTCATGATGAATCTAGAATTGATTACATTGCTTCCCTCTGTGAAAATACAAATCCTGACCAAAGATACATATCTGAGATTCTGTTAGCTTCAGGCCTCCTGCTGAGAGACCTGAGCTCTGAGCTGCTGACATTTCCACTTCATCCTTCAGGTCATCCCATTAACCCCGAGCTATTTTTCGTGTTAGAGCAAACCAAGGCTAGTAGTTTCCTTCCGAAAGAAGAATGTGACACAGGAAAAGTTGCTTGCTCGAAGCTAAATGCAGAGAAAGTTCACAGGAAACTCATATTTGATGCTGTGAATGAGATTCTTGGTGTGAAGTTAGCTTTAGTTAGCTCTTCTCCTGCACCTTGGGTGAAGCCTAGCAGACTCACCAAGAAAACCCTGAGTGCACAAAAACTTCTTAAAGAACTGTGCTTTGAGATAGAAAAAATCCAATTCAAGAAGCGAGACAGCAGCCTAGAAGATGAAGAAGATGGTCTCAAAAGTATACTCTGGGAAGATGTGATGCATGGCTCAGAGAGTTGGATAGATTTCCATGGTGAAATATATGGGGTTGTGTTGGATGCTGAAAGATTGATATTTAAGGCCTTAGTTGATGAGATTGTGGTGGGCGAAGGAGCTGACCTGCGAATCAAGTCAGGTAGGCGCAAGAAGCTGTTTGGTATGTAG 3333 0.4254 MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHHVLTARRINQKRLPPANRSRGNPHFGDGIFEKDSSNASQQQIASNLLQDVSSNKGVGEKQRISTESSRASFSSSCSSSLSSLDCRAQVEGSFDRIIYPEIPSREPVMNQTTASPHLGPQSLDLRGVVKDSMYREARGLMIKKPIAEEEAAFHAMKHRDSPRPLQLSKSVDGSCGVGIDGKQSVPVDVKESLRVLAKLREAPWYYGEAREIPRSSSEVKDGHWHLISKDAPRFSYDGREISRLSFESRDTIKGPQKLKELPRLSLDSREGSWCTYSSDLKPNHLSRGLGRGNTISDDKMCSLPQSAATQRRPPSVVAKLMGLEALPDSYMAVDTPLNLRGNLSAQHDNQFPKSSKTELIKPLKVFNSSKGSLKDPTSPRRKNPDLVMKPISSSRFPIEPAPWKQQDVNRSSQKSSLNAMKAPARTPDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQAKGLLETREEEQAVDDGSQRDNGTNTVNLIQNPRSVRQQNAHSNNFLSSSRRVADSTRACESPIVVMKPARLVDKTGISASSAIPVGGLSGFHKLDSLANEDKKRSSASSRISQDHSPKNSRRDGTASSNVWKAGSGKTIKSAQSQPRSQQFSKEKSSSSVTNSGSVSPRMQQKKLEFERRSCPQTPPSDSNKTRRKYSKQATDSGSLGGKLRPKSPFSQHTDNPLSLIRNETRTSSCQKDEIFVESDSITVSDSNVDMEVSSSLHLSQTNDIPSPSMKTMKQPISGPMQKEPIQRLDEDESIADIAINSQEHPSPVSVLDGSVYRDNEPSPVKQIADTPKADGAQEYNGNENEDWWDPVDKLVNREGFGEINRKKLQSIDHLVHKLRRVNSSHDESRIDYIASLCENTNPDQRYISEILLASGLLLRDLSSELLTFPLHPSGHPINPELFFVLEQTKASSFLPKEECDTGKVACSKLNAEKVHRKLIFDAVNEILGVKLALVSSSPAPWVKPSRLTKKTLSAQKLLKELCFEIEKIQFKKRDSSLEDEEDGLKSILWEDVMHGSESWIDFHGEIYGVVLDAERLIFKALVDEIVVGEGADLRIKSGRRKKLFGM 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1879 1110 PANTHER LONGIFOLIA PROTEIN 1 1108 IPR033334 GO:0051513
Lele24g1879 1110 Pfam DUF761-associated sequence motif 338 361 IPR032795 -
Lele24g1879 1110 MobiDBLite consensus disorder prediction 618 666 - -
Lele24g1879 1110 Pfam Domain of unknown function (DUF4378) 908 1088 IPR025486 -
Lele24g1879 1110 MobiDBLite consensus disorder prediction 595 617 - -
Lele24g1879 1110 MobiDBLite consensus disorder prediction 65 111 - -
Lele24g1879 1110 MobiDBLite consensus disorder prediction 436 453 - -
Lele24g1879 1110 MobiDBLite consensus disorder prediction 762 779 - -
Lele24g1879 1110 MobiDBLite consensus disorder prediction 762 783 - -
Lele24g1879 1110 MobiDBLite consensus disorder prediction 595 731 - -
Lele24g1879 1110 MobiDBLite consensus disorder prediction 513 549 - -
Lele24g1879 1110 MobiDBLite consensus disorder prediction 41 111 - -
Lele24g1879 1110 MobiDBLite consensus disorder prediction 712 729 - -
Lele24g1879 1110 MobiDBLite consensus disorder prediction 398 459 - -
Lele24g1879 1110 MobiDBLite consensus disorder prediction 824 849 - -
Lele24g1879 1110 MobiDBLite consensus disorder prediction 502 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1879 Lele-ChrLele24 23566257 23571433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1879 140 1109 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 46.285 0.0 675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1879 24 23566257 23571433 Lele24g1879 24 23566257 23571433 ECH
Lele21g1968 21 26677138 26682310 Lele24g1879 24 23566257 23571433 hybridization
Lele22g1931 22 24006889 24016981 Lele24g1879 24 23566257 23571433 hybridization