Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1866 ATGGCTGCTCTGCGACGGGAAGGGAGGCGCTTTGCCCCTCTCATCTCTCCCCAACCATTGACGGCTCTCCGATCTTCCCTCATCTCTGAGGAGCAAGTCCCCCAGGGTGTGCGCTCCATTTCAACTCAAGTAGTCAGAAATCGGATGAAGAGTGTTAAGAATATCCAGAAAATTACAAAGGCAATGAAGATGGTTGCAGCTTCAAAACTGCGGGCTATTCAAACTAGAGCTGAAAATTCTCGTGGCCTATGGCAGCCATTTACTGCGCTTCTGGGTGACACTCCCAGTGTTGATGCGAAGAAGAATGTTATTATTACTGTTTCTTCTGACAAAGGTCTATGTGGTGGAATCAATTCTACCGCTGTCAAGATAAGCAGGGCTGTGCACAAACTGAATTCTGGGCCTGATAAAGATACCAAGTATGTTATTTTGGGAGAGAAAGCTAAGGCTCAATTGGTACGTGACTCAAAGCAAGACATTGAGATCATCTTAACCGAGCTGCAGAAAAATCCCCTAAATTATACCCAGGTCTCTGTCCTGGCAGATGATATCTTAAAGAATGTGGAGTTTGATGCTTTGAGGATTGTTTTCAACAAGTTCCAATCAGTTGTCTCATTTTTGCCAACTATGTCAACTATATTATCTCCTGAGATTGTGGAGAGAGAGACTGAATCTGGGGGAAAGCTCGGAGAATTGGACTCTTATGAGGTGGAAGGTGGTGAGACAAAATCAGAAATACTTCAAAATCTGGCTGAGTTCCAGTTTTCTTGTGTCCTGTTTAATGCGGTATTGGAGAATGCTTGCAGTGAGCAAGGAGCAAGGATGTCTGCCATGGACAGTTCTAGCAGAAATGCTGGGGATATGCTTGACCGCCTCACCCTCACCTATAATAGAACTCGTCAAGCATCCATTACCACTGAATTGATTGAGATTATCTCAGGAGCATCAGCTCTAGAAGGTTGA 963 0.4465 MAALRREGRRFAPLISPQPLTALRSSLISEEQVPQGVRSISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAIQTRAENSRGLWQPFTALLGDTPSVDAKKNVIITVSSDKGLCGGINSTAVKISRAVHKLNSGPDKDTKYVILGEKAKAQLVRDSKQDIEIILTELQKNPLNYTQVSVLADDILKNVEFDALRIVFNKFQSVVSFLPTMSTILSPEIVERETESGGKLGELDSYEVEGGETKSEILQNLAEFQFSCVLFNAVLENACSEQGARMSAMDSSSRNAGDMLDRLTLTYNRTRQASITTELIEIISGASALEG 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1866 320 Gene3D - 65 277 - -
Lele24g1866 320 PIRSF ATP_synthase_gamma 8 318 - -
Lele24g1866 320 Gene3D ATP synthase, gamma subunit, helix hairpin domain 45 315 - -
Lele24g1866 320 PRINTS ATP synthase gamma subunit signature 296 317 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele24g1866 320 PRINTS ATP synthase gamma subunit signature 99 118 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele24g1866 320 PRINTS ATP synthase gamma subunit signature 265 284 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele24g1866 320 PRINTS ATP synthase gamma subunit signature 191 208 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele24g1866 320 CDD F1-ATPase_gamma 41 315 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele24g1866 320 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 41 318 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele24g1866 320 FunFam ATP synthase subunit gamma 65 277 - -
Lele24g1866 320 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 42 318 IPR035968 GO:0015986|GO:0045261|GO:0046933
Lele24g1866 320 ProSitePatterns ATP synthase gamma subunit signature. 304 317 IPR023632 -
Lele24g1866 320 Pfam ATP synthase 43 318 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele24g1866 320 Hamap ATP synthase gamma chain [atpG]. 39 318 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele24g1866 320 FunFam ATP synthase gamma chain 273 315 - -
Lele24g1866 320 PANTHER ATP SYNTHASE GAMMA CHAIN 28 318 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1866 Lele-ChrLele24 23480973 23485510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1866 10 318 Primary Pumps ATPases AT1G15700 29.444 3.03e-30 116