Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1842 ATGGGTTGTGTGAATGCGAAGCAGGCCGTGTCGGTGACGCCTGCTATTGACCACTCCGGTGTGTTTCGTGGCAATGCGGGTACGGGAAATTCTGGAAGGAATTTAGGAGAGTCGGAGAAGAAGAAGAAGAAGAAGAAGAGCGAGTCAGTGGGGCTGAGTAGAAGCGAGGTGGGTGATTCGGGAAGGGCGAGTCCGAATGGAGGTTGTGACTCGTATAGTTTCAGATTGGGGAATCTGCAAAAGTATGTAGAAGGAGAGCAAGTAGCGGCGGGTTGGCCGGGTTGGCTTACCGCCGTCGCCAGTGAAGCCATTAAGGGTTGGGTGCCCCTACGAGCCGATGCGTTTGAGAAACTTGAGAAGGTTGAACAATTGCACAAAATCTTCAAGCTTTGTGGCTCTCCACCTGAAGAATACTGGAAAAAGTCTAGACTCCCTCATGCAACGTTGTTCAGGCCACAGCAACCATATAATAGTTGTCTCCGAGAGACCTTTAAAGATTTGCCTCCACCTAGTGTGAACTTGCTACAGACTCTTCTTTCCATTGAACCATGCAAACGTGGAACTGCCTCCTCTGCTCTCTCGTCAGAGTATTTCAAAACAAAGCCATATGCTTGTGAACCATCAAGCTTGCCGATATACCCTCCTAGCAAGGAGATTGATGTTAAACAGCGAGAGGAGTCAAGGAGGAAAAATATTGGTGGAAGAGCACGTGGACCTGAAACAAGAAAACCATCAAGAAAGCCATTAGGATTCAACAAATTAGTCCCAACAGAGGATTTGGCTAGTCAAACCCATAAATTCCAAAGGGTAAATGGCAGGTCAGTCCACATGCTTAAAGAAGGGAACACCAATGTAGTTAAGGAGGAACCAAAGCCATCTAGTGGTAAAGCAGATGATGCTTCCCATACGAAGAATGCATCTCAAGGAGATATTCCCTTTTCTGGGCCATTGCAAGTTTCTACATCAAGTGGTTTTGCAAACATGGAAAATAAGGATTGTTTGGGACGCTCCAACTCTCAGTGTCATGATCCACTTGAAATCCCTAAGCTTGCCATGCAAAATCAATGGAGCAAGTTTGATCTCCCAGATTCTTTTGATGCTTCTGATGAATACCACTCACAGGAGCTATCTATGGCACTTTATCATAGAGAGGATTCAATATCCAAGAGAAGTAACCTGATGGTGCAACAATGTGAAACACCCATTTTAATAAATTTTCATTGGCTTATTGTACAACCTACTGGTAAGAAGCAAGGGAAGCAGGCTGTGAGATCAGATGGTACAAGAAATCTCTTTCCTGTAAGAGAAGACCATCTCTCCATTCTCCAATCACATTGCTATGAGCAACAACTAAGCTGCAGAATTGACAAAGACGCGGTATCCGGCAGCTTTATTAGATCCTTCTTTGTTGGGAAACTGACTGAAAACTTGAGGAAACGTAGCCCTTTCAGCCTTCAATTCGTACTTCATTGA 1473 0.4501 MGCVNAKQAVSVTPAIDHSGVFRGNAGTGNSGRNLGESEKKKKKKKSESVGLSRSEVGDSGRASPNGGCDSYSFRLGNLQKYVEGEQVAAGWPGWLTAVASEAIKGWVPLRADAFEKLEKVEQLHKIFKLCGSPPEEYWKKSRLPHATLFRPQQPYNSCLRETFKDLPPPSVNLLQTLLSIEPCKRGTASSALSSEYFKTKPYACEPSSLPIYPPSKEIDVKQREESRRKNIGGRARGPETRKPSRKPLGFNKLVPTEDLASQTHKFQRVNGRSVHMLKEGNTNVVKEEPKPSSGKADDASHTKNASQGDIPFSGPLQVSTSSGFANMENKDCLGRSNSQCHDPLEIPKLAMQNQWSKFDLPDSFDASDEYHSQELSMALYHREDSISKRSNLMVQQCETPILINFHWLIVQPTGKKQGKQAVRSDGTRNLFPVREDHLSILQSHCYEQQLSCRIDKDAVSGSFIRSFFVGKLTENLRKRSPFSLQFVLH 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1842 490 MobiDBLite consensus disorder prediction 214 322 - -
Lele24g1842 490 MobiDBLite consensus disorder prediction 218 247 - -
Lele24g1842 490 MobiDBLite consensus disorder prediction 299 322 - -
Lele24g1842 490 MobiDBLite consensus disorder prediction 35 52 - -
Lele24g1842 490 MobiDBLite consensus disorder prediction 282 298 - -
Lele24g1842 490 SUPERFAMILY Protein kinase-like (PK-like) 115 219 IPR011009 -
Lele24g1842 490 MobiDBLite consensus disorder prediction 20 65 - -
Lele24g1842 490 Gene3D Transferase(Phosphotransferase) domain 1 96 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1842 Lele-ChrLele24 23339798 23344821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1842 122 265 Core Cell Cycle Gene Families AT5G10270 36.552 4.63e-20 91.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1925 21 26424647 26429409 Lele24g1842 24 23339798 23344821 hybridization
Lele22g1895 22 23741340 23746097 Lele24g1842 24 23339798 23344821 hybridization