Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1840 ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTGGAGATCTCCGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCACAGATGTGTTGGAAGAAGATGAATACAAAGTTTATATGGGGGGGATTGTAGCTCAGCTACAGGACCACTTTCCTGATGCTTCTTTCATGGTGTTTAACTTCAGGGAAGGGGAAAAGCGTAGTCAAATTTCAGATATATTGTCTCAATATGACATGACGGTTATGGAATACCCTCGTCAATATGAGGGTTGTCCTCTTCTGCCTTTGGAAATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAAAATGTTCTTTTGATGCATTGTGAAAAAGGAGGTTGGCCTGTGCTTGCGTTTATGCTAGCAGGTCTTCTATTGTACCGGAAACAGTACAATGGGGAGCAAAAAACCCTTGAAATGGTCTACAAGCAAGCTCCTAAAGAACTTCTCCACCTTCTATCTCCTTTGAACCCACAACCTTCTCATTTGAGATATCTTCAATACATTTCCAGGAGAAATATGGGTTCTGAGTGGCCTCCATCAGACACACCCTTATATTTGGATTGTCTGATTCTTAGAGTCCTTCCATTATTTGATGGCGGACAAGGTTGTAGGCCTGTTGTACGTGTTTATGGTCAGGACCCTTCAAAACTTGTTAATAGAAGTTCTAAGCTTCTTTTTTCTACTTCAAAAAACAAAAAACATGTTCGCCTCTACCAACAGGCAGAGTGTATGCTGGTGAAAATTGATATCCAATGTCGTGTTCAAGGGGATGTGGTTCTTGACTGCATACATACGGACGATGACTTAAGTCGTGAGGAGATGATGTTTAGAGTTATGTTTCACACAGCATTTGTGCGTTCAAACATATTGGTGCTCACCTGTGATGAGGTTGATATTTTGTGGGATTCTAAGGATCAATTTCCTAGGGATTTTAAAGCAGAGGTACATTTTTTGGACTCTGATGCTGTTATGCCTAATCTAACCACAGTCAGGGCAAGTGCAGATGCAAATGAGACAGGAACTGCCTCACCTGAGGAATTTTATGAGGTGGAAGAGATATTTAGCAATGTAGTTGATGTGCAGGAAGGTAAGATAGATTATGATTCTCTTCTGGGTCAAGACAGTGTAATAGATGATCAAAACCGAAAACAAGTATGGAAAGAGGACTTCGGTCCTCCCACTCAGGAATGTACATCAGATGATCGGACCTACAAACAGGACAGAAGGATGGATTCTGGTACTAATGCGGTGAAAGACATTTCTGTTGATGATGTGAAGTACAATCTCGATGAGAGTGTGGATTCTAATTATCATGAAGTGAAAGATATTGCAGTGGATGATGGAGAAATTAAGCATACTTCTACAGTAGTCACTACTGATTTCATTATGGAAATGAAGGATCTCAATGAAGACATGCCTGGGCAATTGGAAGCTACGGACAACAAATATGATGAATTTGGCAATGCAATAGAGAAGAAATTAGATTCCAAGGAAGGCCCGCAGAAACATGATTTTTCCAGACAAAAATCTGATAAAGTACCACCTGTGGCAAAAAAACAACTTTTGTCAAACTTGAAGCCAGTGGGAGATACCTTTACAGCTAAGCAAAAGATTAAGCAGCTTGAATCACAAGGTAGTCAAGCAAAACAAGCAAAGCCAAATGCAGTACCTAGGTGGATTCCTTCTAACAAAGGTTCTTACACAAATTCAATGCATGTTTACTATCCACCATCAAGGTATAATAGTGCACCTGCCGCACTTTCCAACGCTAACTCTTCAAAGGAGAAAACTATAGATGCCAAATCAAGTGACAAGGCAAATGGATTGAAATGTCAAAAGGTGGACGTACCAAAATTTGTAGACTCCATTGCCGAAATGGAAGAAGAAAACTTACCATCAATTAATGAGACATGTCTTCAAACACCAAGTCAAGCACCACTTAGTAGCTCGACACAAGTGTTGCAACCTCATCCTCCTCCTCCCTCACCACCCCCACCCCCACCCCCACCCCCACCCCCACTCTCATTTCATGGTAAAAACTCTATGGCATATGCTTTTGAAACATCATCTGTTAGTGGACAAAACCAAGAGATGGATTTACAACCTGCAACTTCTTCATCTCCTCCTCCTCCACCCCCTCTACCCCCTCCTCTTTTTACTAATAGAACAATCACGTCAGGAGTTTTTGGAATGTCTAGTGTAATTGCCCCTCCTACTCCCCCTTCTCATCTTTCACCACCACCACCTCCGCCTCCACCACCTCCAAGGTATGGGCTTTCAATCTTTCCACCTCCCTATCCCCCTTCACCCCCACCCCCACCCCCACCACCACCACCACCACCGCCACCTTCAAGGGGTATTTCTCCATTGTTGTCTACACCCACATCACTGCTCCAATCTTCACCTTCACCTACCCAATCCTTACCTTTTTTGCAAAAAGCTCCATCACCGCCACTGCCACCGCCACCTCCCTTCAGTAGAACTTCATTGCCCCCACAATTGTCTCCTTTGAATAAAGCTCCACCACCCCCACCTTCACCTTCACCTTCTTTTGGTCAAGCTCCACCCCCACCCCCACCTCCACCTCCCCTATCTCTACCTCCTTTGAGTGGAGTGCTGCCGCCGCCGCCGCCACCTCCTCCACCTCCTTTGAGTAGGGCTTCACCACCACCACCTCCTCCTTTTAGTAGAGCTCCACCCCCACCTCTATCAAGAGGAGCACCGCTTCCACCACCGCCTCCTCCATCAAGAGGGGCACCACCTCCACCACCACCTCCACCATCAAGAGGGGCACCACCTCCACCACCACCTCCCCAATCAAGAGGGGCACCACCTCCACCACCACCTCCCCCATCAAGAGGAGCACCCCTTCCCCAATCAAGAGGAGCACCCCCTCCACCGCCACCTCCATTAAATGGAGCGCCTCCACCACCCCCACCTCCAATGTCTAGAGCCCCACCTCCTCCACCACCTCCTGGAGGTAGAGGCCCACCTCCTCCCCCTCCTCCTGGAGCACGTGCTCCTACTCCCCTTGGACCTCCAAGTGGTACACCGTTACCACCTCCACTCTTTGGCTCAAAAGGTTCAAATTCTGATCCAAGAGGAAGAGGGCATGGACTTTCACGTCCTAGTGGGGGTGGTGCAATAGCACCTCGACGATCCTCCTTAAAGCCTCTACATTGGAGTAAGGTGACAAGGGCAGTGCAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCTCAAATTGCCCCAGAATTTGACTTTTCAGAGCTAGAGAGCCTTTTCTCTGCAAATGTTCCTAAACCTGCTGGTTCAGGTGGTAAATCTGGAGATCGACGTAAATCTGCCGGGTCCAAACCTGACAAAGTTCACTTGATTGACCTGCGGAGGGCCAATAATACTGAAATTATGCTTACAAAGGTTAAGATGCCCCTTTCTGATATGATGGCTGCAGTACTAGCTATGGATGAGTCGGTATTAGATGTTGATCAGGTTGAAAATCTCATCAAATTTTGTCCTACTAAAGAGGAAATGGAACTTTTGAAGGGATATGCTGGGGACAAGGAGAATTTGGGAAAGTGTGAGCAGTATTTTTTGGAGCTGATGAAAGTTCCACGAGTGGAGTCAAAATTAAGAGTATTTTCTTTCAAGATCCAGTTTGGTTCTCAGATTACTGAATTCAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCGAAAATCTGTCAAACTGAAGGAGATAATGAAGAAAATTCTTTACTTGGGGAATACCCTGAATCAAGGAACAGCGAGGGGATCTGCAGTTGGATTCAAGTTGGATAGTCTATTAAAGCTCACTGACACTCGTGCTACTAACAATAAGATGACACTCATGCATTACCTTTGCAAGGTCCTTGCTGAAAGAGCACCTGGACTCCTTGATTTTCACCTAGACCTAGTCAGCCTGGAAGCTGCTACTAAGATACAATTGAAGTCATTAGCTGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTCAAGCAGGAGCTTGCTGCATCTGAAAATGATGGACCTGTATCTGAAGTTTTCCGCAAGACATCAAAAGAATTTGTTGTTGGTGCTGAGTCAGAGGTGGCATCTGTAACAACTTTATATTCTGTGGTGGGTAGAAATGCAGATGCACTCGCGCTTTATTTTGGTGAGGATCCTACCCGTTGCCCATTTGAGCAAGTTACTGCAACTCTCCTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAAAATTGTAAGCAAGCAGAGTTAGAGAAGAAAAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCTAAGGGTGTTAACTTGACAAAGAAAAGTGCAAGATAG 4437 0.4523 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYKVYMGGIVAQLQDHFPDASFMVFNFREGEKRSQISDILSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCEKGGWPVLAFMLAGLLLYRKQYNGEQKTLEMVYKQAPKELLHLLSPLNPQPSHLRYLQYISRRNMGSEWPPSDTPLYLDCLILRVLPLFDGGQGCRPVVRVYGQDPSKLVNRSSKLLFSTSKNKKHVRLYQQAECMLVKIDIQCRVQGDVVLDCIHTDDDLSREEMMFRVMFHTAFVRSNILVLTCDEVDILWDSKDQFPRDFKAEVHFLDSDAVMPNLTTVRASADANETGTASPEEFYEVEEIFSNVVDVQEGKIDYDSLLGQDSVIDDQNRKQVWKEDFGPPTQECTSDDRTYKQDRRMDSGTNAVKDISVDDVKYNLDESVDSNYHEVKDIAVDDGEIKHTSTVVTTDFIMEMKDLNEDMPGQLEATDNKYDEFGNAIEKKLDSKEGPQKHDFSRQKSDKVPPVAKKQLLSNLKPVGDTFTAKQKIKQLESQGSQAKQAKPNAVPRWIPSNKGSYTNSMHVYYPPSRYNSAPAALSNANSSKEKTIDAKSSDKANGLKCQKVDVPKFVDSIAEMEEENLPSINETCLQTPSQAPLSSSTQVLQPHPPPPSPPPPPPPPPPPLSFHGKNSMAYAFETSSVSGQNQEMDLQPATSSSPPPPPPLPPPLFTNRTITSGVFGMSSVIAPPTPPSHLSPPPPPPPPPPRYGLSIFPPPYPPSPPPPPPPPPPPPPPSRGISPLLSTPTSLLQSSPSPTQSLPFLQKAPSPPLPPPPPFSRTSLPPQLSPLNKAPPPPPSPSPSFGQAPPPPPPPPPLSLPPLSGVLPPPPPPPPPPLSRASPPPPPPFSRAPPPPLSRGAPLPPPPPPSRGAPPPPPPPPSRGAPPPPPPPQSRGAPPPPPPPPSRGAPLPQSRGAPPPPPPPLNGAPPPPPPPMSRAPPPPPPPGGRGPPPPPPPGARAPTPLGPPSGTPLPPPLFGSKGSNSDPRGRGHGLSRPSGGGAIAPRRSSLKPLHWSKVTRAVQGSLWEELQRHGEPQIAPEFDFSELESLFSANVPKPAGSGGKSGDRRKSAGSKPDKVHLIDLRRANNTEIMLTKVKMPLSDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYAGDKENLGKCEQYFLELMKVPRVESKLRVFSFKIQFGSQITEFKKSLNTVNSACEEVRKSVKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRATNNKMTLMHYLCKVLAERAPGLLDFHLDLVSLEAATKIQLKSLAEEMQAIIKGLEKVKQELAASENDGPVSEVFRKTSKEFVVGAESEVASVTTLYSVVGRNADALALYFGEDPTRCPFEQVTATLLNFIRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGVNLTKKSAR 1478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1840 1478 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Lele24g1840 1478 SMART PTEN_C2_2 198 338 IPR014020 -
Lele24g1840 1478 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Lele24g1840 1478 Gene3D Formin, FH2 domain 1067 1452 IPR042201 -
Lele24g1840 1478 MobiDBLite consensus disorder prediction 1456 1472 - -
Lele24g1840 1478 MobiDBLite consensus disorder prediction 672 695 - -
Lele24g1840 1478 CDD PTP_PTEN-like 16 190 - -
Lele24g1840 1478 MobiDBLite consensus disorder prediction 604 627 - -
Lele24g1840 1478 Pfam Formin Homology 2 Domain 1072 1440 IPR015425 -
Lele24g1840 1478 Gene3D - 205 337 - -
Lele24g1840 1478 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1141 1468 - -
Lele24g1840 1478 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1065 1466 IPR015425 -
Lele24g1840 1478 MobiDBLite consensus disorder prediction 808 829 - -
Lele24g1840 1478 MobiDBLite consensus disorder prediction 652 671 - -
Lele24g1840 1478 MobiDBLite consensus disorder prediction 1118 1142 - -
Lele24g1840 1478 MobiDBLite consensus disorder prediction 513 533 - -
Lele24g1840 1478 SMART it6_source 547 1478 IPR015425 -
Lele24g1840 1478 Coils Coil 1441 1475 - -
Lele24g1840 1478 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Lele24g1840 1478 PANTHER FORMIN-J 1 1472 - -
Lele24g1840 1478 Coils Coil 1347 1374 - -
Lele24g1840 1478 MobiDBLite consensus disorder prediction 701 722 - -
Lele24g1840 1478 MobiDBLite consensus disorder prediction 758 807 - -
Lele24g1840 1478 MobiDBLite consensus disorder prediction 723 738 - -
Lele24g1840 1478 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Lele24g1840 1478 MobiDBLite consensus disorder prediction 561 582 - -
Lele24g1840 1478 MobiDBLite consensus disorder prediction 650 1075 - -
Lele24g1840 1478 FunFam Formin-like protein 1065 1452 - -
Lele24g1840 1478 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Lele24g1840 1478 MobiDBLite consensus disorder prediction 830 1040 - -
Lele24g1840 1478 MobiDBLite consensus disorder prediction 1456 1478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1840 Lele-ChrLele24 23322914 23331700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1840 1 609 FH2 protein (formin) Gene Family AT5G07740 66.176 0.0 805
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1924 21 26408877 26417399 Lele24g1840 24 23322914 23331700 hybridization
Lele22g1892 22 23723716 23727771 Lele24g1840 24 23322914 23331700 hybridization