Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1833 ATGGAGATTGAAGGCTTTGATTTGAACAAAGTCTATGCTAATGCTGGAAATTATAGCAAGAGGGCTGACGATTTCATTGATAGAAGCAAGGTGAAAATATTGTTGTGCGATAACGATACCAACAGTTCGGAAGAGGTTTTAACACTTCTTTCGGGATGTTCTTATCAAGTTACTTCAGTAAGCTCGCCAAGACAGGTAATTGATGTACTGAATGCAGAGGCGCAAGATATTGATATCATACTAGCTGAAGTTGACCTTCCAATGAAGAAGGGCATGAAGATGTTGAAGTACATTGCACGAAGCAAAGATTTGCATCGAATTCCTGTCATAATGATGTCGGCACATGATGAGGTATCCATTGTTATGAAGTGTTTGAGACTTGGAGCAGCAGACTATCTAATAAAGCCTTTACGCTCTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGCTTGGTCTGACAGAGAAGAACATAATGAACTATAATTTTGATCTAGTAGCATCAGCCATAATGAACTATGATTCTGATCTGGTAGCATCATACCCTGGAGATGGTAATACAACCAGAACCGCCTTGTTCTCAGATGATACAGAAGACAACTCCTACAGAAGCACTAATCCAGAGGCAAGAATGTCAATCCAGCAGCAACATGAGTCTACAGTTGCTGCTGCTGCTGATGTTCCTGAGGAGCCTCCGAGTGCTCATTCATCAGATTATTGGCCTGGTGTGCCTGGAATTAGTGATCGCCAAACAAGACACTGTTCTTCATCAGGACCAAAGAAATGTGGACTAAGGATTGGGGAGTCATCGGCCTTCTTTAGTTATGTTAAAACTACCATGCAAAAGAACAACTTACAAGGGATTCCTCAAGTTCAGAACGATGCTGCAACGCAACTGAGGATGGAAGACATGCATCAAACTTGTCCACAAGGGGTTCATGAAGATGGAGAGCCAAGTAAGAGACCTAATAAAGATGATTTTCCCAGCAGCATCAGTAATCCTGATTCTTTCTCCATCGACAATTCTTGTGCTCCACCCGCGTCCATGGGAATTCTAAATCAAAAGAATTTCAACGAAGAACATTTACCACAGGATGTTATCCATCTTAGAAATGGAGGTCATATTTCTGAGACTGAAGTACCAGGCACTACTTCCCAACAACATGCTCATTTATATTATATTTCAGGGTTCTTCAATCACCTTCTGATGCCATCCTCAGCGCCAATGTATCCTAAGAATCACCGGGAACAACAGAATCATGCTAGTGCAACTATGATTGCACAACACAATGACATTTCCCATTGTCCTCCTAATGGGAAAGGGATAAGTTCCTCCTCATATTACCCGATGACTATGTACTTACAACCTGGTCAGACGATGTCCTCAGCTCATTCACGGCCCCCATTTGGAAGTTCAAGTTCATCCAACGCAAAACTGGGTATAGTTGATAGAAGAGCAGAAGCATTGATGAAGTTTAGAAAGAAAAGGAAAGAACGATGCTTTGATAAGAAGATTAGGTATGTCAATCGGAAGCAGCTTGCTGAAAGGCGTCCTCGAGTGAGGGGACAGTTTGTGAAGAAGTCAAATGGAGCAAGCAATGTTGATCTTAATGGACAACCAGCTTCTATTGAGTATGATGAAGAGGAGGAGGAGGAGGAGGACTAA 1680 0.4202 MEIEGFDLNKVYANAGNYSKRADDFIDRSKVKILLCDNDTNSSEEVLTLLSGCSYQVTSVSSPRQVIDVLNAEAQDIDIILAEVDLPMKKGMKMLKYIARSKDLHRIPVIMMSAHDEVSIVMKCLRLGAADYLIKPLRSNELLNLWTHMWRRRRMLGLTEKNIMNYNFDLVASAIMNYDSDLVASYPGDGNTTRTALFSDDTEDNSYRSTNPEARMSIQQQHESTVAAAADVPEEPPSAHSSDYWPGVPGISDRQTRHCSSSGPKKCGLRIGESSAFFSYVKTTMQKNNLQGIPQVQNDAATQLRMEDMHQTCPQGVHEDGEPSKRPNKDDFPSSISNPDSFSIDNSCAPPASMGILNQKNFNEEHLPQDVIHLRNGGHISETEVPGTTSQQHAHLYYISGFFNHLLMPSSAPMYPKNHREQQNHASATMIAQHNDISHCPPNGKGISSSSYYPMTMYLQPGQTMSSAHSRPPFGSSSSSNAKLGIVDRRAEALMKFRKKRKERCFDKKIRYVNRKQLAERRPRVRGQFVKKSNGASNVDLNGQPASIEYDEEEEEEED 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1833 559 MobiDBLite consensus disorder prediction 463 482 - -
Lele24g1833 559 MobiDBLite consensus disorder prediction 313 329 - -
Lele24g1833 559 ProSiteProfiles CCT domain profile. 490 532 IPR010402 GO:0005515
Lele24g1833 559 MobiDBLite consensus disorder prediction 229 265 - -
Lele24g1833 559 MobiDBLite consensus disorder prediction 518 559 - -
Lele24g1833 559 Pfam CCT motif 490 532 IPR010402 GO:0005515
Lele24g1833 559 Gene3D - 31 233 - -
Lele24g1833 559 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 316 IPR045279 GO:0009736
Lele24g1833 559 MobiDBLite consensus disorder prediction 313 350 - -
Lele24g1833 559 Pfam Response regulator receiver domain 33 144 IPR001789 GO:0000160
Lele24g1833 559 ProSiteProfiles Response regulatory domain profile. 32 150 IPR001789 GO:0000160
Lele24g1833 559 SMART REC_2 31 146 IPR001789 GO:0000160
Lele24g1833 559 MobiDBLite consensus disorder prediction 330 350 - -
Lele24g1833 559 SUPERFAMILY CheY-like 29 157 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1833 Lele-ChrLele24 23288480 23292311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1833 20 552 Response Regulator Gene Family AT5G61380 45.215 3.10e-140 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lele24g1833 Response_reg 6.2e-18 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1833 24 23288480 23292311 Lele24g1833 24 23288480 23292311 ECH
Lele21g1917 21 26370140 26374108 Lele24g1833 24 23288480 23292311 hybridization
Lele22g1885 22 23692297 23696168 Lele24g1833 24 23288480 23292311 hybridization