Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1825 ATGGAAAACATTGCTCTTGTGTATAACACCAAGGATGAAGATCGGATGAATTTGCCTCCTGGATTTCGGTTTCACCCAACAGATGAAGAGCTTATCACTTATTATCTGTTCAACAAGGTCATTCTAACAAACTTCTCTGCCATAGCCATTGGAGAAGTGGATTTGAACAGGTCTGAGCCTTGGGATTTGCCACGGAAAGCAAAACTGGGAGAGGAAGAGTGGGTGTTTCGGAAGAATTCTGGTGGCAACAAAACCCATATGTCAGCTATAATGAGGTTTGATTCCACTGGAAACGGATTGGGCGGTTCTTCAGTTTTACCACCTCTAGCGGATTCTTCTCCTGAATCTGCATACGTGTCCTGCTTCTCCATTGCAATCGATGATCAAAGAAACCATGGAGGGATCTTTGATTCCTTAGGAAACACGAACTCCCTTTGGCGGATTCCTTCAAGTTCTCCTCCAGAAATTCTGCCAAGAATCCCTCTTTCTGGATCATTTCAAGCTCCTGCCAATTTGCCGATATCATCAGGTCTTGCTTTCTCTTGGCAGGACCACCAGAACCTGCTTAAGGCTTTTCTTCAAAACCATGGATCAATCTCCAGGGGAGAACAAATTGTGAGTGTTTCGCAAGAAACTGATATGAATCCTGAGATTTCTCCTGTGATCTCAAGTTTTGATGATTCTGCTGCTACACCAGTAGTGGAGCGCGATAGCTTGTGGAATTACTGA 729 0.4417 MENIALVYNTKDEDRMNLPPGFRFHPTDEELITYYLFNKVILTNFSAIAIGEVDLNRSEPWDLPRKAKLGEEEWVFRKNSGGNKTHMSAIMRFDSTGNGLGGSSVLPPLADSSPESAYVSCFSIAIDDQRNHGGIFDSLGNTNSLWRIPSSSPPEILPRIPLSGSFQAPANLPISSGLAFSWQDHQNLLKAFLQNHGSISRGEQIVSVSQETDMNPEISPVISSFDDSAATPVVERDSLWNY 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1825 242 Gene3D NAC domain 27 99 IPR036093 GO:0003677|GO:0006355
Lele24g1825 242 Pfam No apical meristem (NAM) protein 19 78 IPR003441 GO:0003677|GO:0006355
Lele24g1825 242 ProSiteProfiles NAC domain profile. 18 163 IPR003441 GO:0003677|GO:0006355
Lele24g1825 242 SUPERFAMILY NAC domain 14 78 IPR036093 GO:0003677|GO:0006355
Lele24g1825 242 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1825 Lele-ChrLele24 23246667 23247835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1825 11 76 NAC Transcription Factor Family AT3G29035 72.727 5.03e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele24g1825 NAM 1.5e-14 No_clan