Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1824 ATGGAGAACATTTCTGTACTGTCCAACAAGGAACAAGGTCGTCAGCTGAATTTGCCTCCTGGCTTTCGGTTTCACCCAACAGATGAAGAGTTACTCACTTATTATCTGTACAAGAAGGTCTCTCAACCCAACTTCTCTGCTATCGCCATTGGAGAAGTGGATATATACAAGTCTGAACCTTGGGATTTGCCATGGAAAGCGAAAATGGGAGAAGATGAATGATTAGATGGACGATTCTCTGTGCCAAGCTCCTCAAGAACTGTAAAGCTGCCAACTTTACTTTCCCCTGTTTCCTGCGTTTTCGTCTCAATTCTCTGTTTAACTGAATCTGTTATGATTTTGCAGAACGAGTGGATCATTTGCAGGGTTTTCCGTAAGACGTTTGGAGGAAAAAAGAGCCACTTTTCTGGAATAATGAGATGGGAATCCATTGGAAATAGACAGGGGTCCTCAGGTTCAGTGTCACTTTCACCACCTGCAATAAATACTGATTTGGTCCATGTGTCCTGCTTCTCCTCCCCGTGCTATGATGAAGACGAGCAAGCAGGGAATCTTCATTCTGCAGGAAACTCGCTTTCGGGGATTTTTTCGAACCCTCAAGAATCTGTGCCAAGAATCCCTCTTCAAGCTCCTATGAATCTGCCACTGTCAGATTCTGCTTTTACTGTGCAGGAACAGAACTTCCTTGATTCAGTTTTTGAGAACCGTGGATCGAGCTTGAGAAATGGTTTTATATCAGCGATGATGGAGCAAGTGGACGGTGTTTCGCCGGAAACGGGTCACACCGCCACTCACATGGATCCGGCGATATCTTCTTTGATATCAAGTTTTGGTAATCAGCAAAACCCATCTGCTTCTTATGCAGCACCTGCACCAGTTGACCTTGATAATTTGAACAACTTCGGTAGTTATTACTCTTACTAG 924 0.4416 MENISVLSNKEQGRQLNLPPGFRFHPTDEELLTYYLYKKVSQPNFSAIAIGEVDIYKSEPWDLPWKAKMGEDEXLDGRFSVPSSSRTVKLPTLLSPVSCVFVSILCLTESVMILQNEWIICRVFRKTFGGKKSHFSGIMRWESIGNRQGSSGSVSLSPPAINTDLVHVSCFSSPCYDEDEQAGNLHSAGNSLSGIFSNPQESVPRIPLQAPMNLPLSDSAFTVQEQNFLDSVFENRGSSLRNGFISAMMEQVDGVSPETGHTATHMDPAISSLISSFGNQQNPSASYAAPAPVDLDNLNNFGSYYSY 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1824 307 SUPERFAMILY NAC domain 14 73 IPR036093 GO:0003677|GO:0006355
Lele24g1824 307 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 74 - -
Lele24g1824 307 Gene3D NAC domain 27 80 IPR036093 GO:0003677|GO:0006355
Lele24g1824 307 ProSiteProfiles NAC domain profile. 18 209 IPR003441 GO:0003677|GO:0006355
Lele24g1824 307 Pfam No apical meristem (NAM) protein 19 73 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1824 Lele-ChrLele24 23240896 23242109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1824 16 301 NAC Transcription Factor Family AT5G07680 31.909 4.49e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele24g1824 NAM 4.1e-14 No_clan