Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1811 ATGAAGAAGGTGGTAACAAGAGTTGACAGCACGGTGGTTCGAAACATTCGATACGGTGAATGTCAGAAGAATCATGCAGCTTCCATGGGAGGCTATGCTGTGGATGGTTGCAGAGAGTTCATGGCCAGTTCCAGAGAAGGAACAAGTGGGGCTCTTACTTGTGCGGCTTGCGGCTGCCACCGCAATTTCCACAGAAGACAAGAGCAAGTCGTCGAGGGGCGTCTTGTGGATTGTCCAACAGATTCCATTCTTGATTTCTTGTCAAGGATTTATATTGGAAACTTCAGATTCTCAGAGTTTGTCTTGTAA 309 0.4693 MKKVVTRVDSTVVRNIRYGECQKNHAASMGGYAVDGCREFMASSREGTSGALTCAACGCHRNFHRRQEQVVEGRLVDCPTDSILDFLSRIYIGNFRFSEFVL 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1811 102 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 18 67 IPR006456 -
Lele24g1811 102 Pfam ZF-HD protein dimerisation region 16 68 IPR006456 -
Lele24g1811 102 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 17 67 IPR006456 -
Lele24g1811 102 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 14 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1811 Lele-ChrLele24 23177661 23178163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1811 12 67 Zinc finger-homeobox gene family AT3G28917 78.947 3.58e-28 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele24g1811 ZF-HD_dimer 7.8e-30 No_clan