Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1810 ATGGTGAGACCTCCTTGCTGCGACAAAATTGGGGTTAAGAAAGGACCTTGGACTCCTGAAGAAGACATCGTCTTGGTCTCCTACATCCAAGAACACGGTCCTGGCAATTGGAGATCCGTTCCCACCAATACCGGGGTTGAACAATGTTTATGTAAAATGAGTGAGTGCAGGTGGGCGGCCATAGCTTCTTATCTTCCACAGAGAACAGACAATGACATAAAGAACTACTGGAACACGCATCTGAAGAAGAAGCTCAAGAAGAAGGGTGAATATGGCGGCGGCGGCAGGGAAGGTGGTAGCGGTAAGGATCAAGAAGACGGTGGTTATTTGTCGTCATCTTCACAACAACCAAACAAGGGTCAGTGGGAAAGAAGGCTTCAAACCGATATCCACATGGCCAAACAAGCCCTTTGTGAAGCTCTCTCCATTGACAAGCCCACTCCTTCAACATTAAATCATAATTTCCCCATCTTCTCAGACAGTAATAATAATAATAATAAGCCCTCATCATCATCATCCATTTACTTCAACCCCATCACCACAAAAAAATTACCCGACCAACTAGAACCTAATTCATCGTACGCATCGAGTGCTGATAATATAGCTCGACTTCTGCAAAACTGGATGAAGAAGAAGCCGAACTCGGTCTCTGGTTCGACTTCGAGTGAAGGTGAAGGAGCACAGAGTGGTAGTGGGACCACAACACCAGATCAGGCCCTTGACTATAGCTCTCTCTTGAGCTTCAACAATAACAACAACTCTGATGTGTCTACAGAGAGTAATAGCTTCTTACAAGAAGAAAGCAAGCCGAATTTGGATGCTCATCATCATCACGTGCCTTTCACGCTTCTGGAGAATTGGCTTTTTGATGATGCTGCAAATCCTCAAGGCCACGAAGATCTGTTGACCATGTCACTTCAGGAAACTACAGCAGATCACCTATTTCAGGCTCACTTGGGGAAGGAGAAATTCTAG 975 0.4533 MVRPPCCDKIGVKKGPWTPEEDIVLVSYIQEHGPGNWRSVPTNTGVEQCLCKMSECRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKKGEYGGGGREGGSGKDQEDGGYLSSSSQQPNKGQWERRLQTDIHMAKQALCEALSIDKPTPSTLNHNFPIFSDSNNNNNKPSSSSSIYFNPITTKKLPDQLEPNSSYASSADNIARLLQNWMKKKPNSVSGSTSSEGEGAQSGSGTTTPDQALDYSSLLSFNNNNNSDVSTESNSFLQEESKPNLDAHHHHVPFTLLENWLFDDAANPQGHEDLLTMSLQETTADHLFQAHLGKEKF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1810 324 CDD SANT 16 81 IPR001005 -
Lele24g1810 324 SMART sant 13 83 IPR001005 -
Lele24g1810 324 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 49 - -
Lele24g1810 324 MobiDBLite consensus disorder prediction 212 268 - -
Lele24g1810 324 SUPERFAMILY Homeodomain-like 11 77 IPR009057 -
Lele24g1810 324 MobiDBLite consensus disorder prediction 87 122 - -
Lele24g1810 324 MobiDBLite consensus disorder prediction 154 174 - -
Lele24g1810 324 MobiDBLite consensus disorder prediction 106 122 - -
Lele24g1810 324 Gene3D - 12 87 - -
Lele24g1810 324 MobiDBLite consensus disorder prediction 88 103 - -
Lele24g1810 324 Pfam Myb-like DNA-binding domain 14 81 IPR001005 -
Lele24g1810 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 85 IPR017930 -
Lele24g1810 324 ProSiteProfiles Myb-like domain profile. 9 81 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1810 Lele-ChrLele24 23163384 23164637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1810 1 306 MYB Transcription Factor Family AT5G62470 42.340 4.02e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele24g1810 Myb_DNA-bind_6 2.1e-07 CL0123