Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1805 ATGGAAGGAGGTGATGATCTCCACCACCGCCCGCATCTCCACCGTCCCACCTTTCCCTTTCAGCTCCTCCAGAACAAAGAAGATCAAGAAGCTGCTCCTTGCTCCTCCTCTTCTCCTTACCCTTCCTTGGCCATCTCTGCCGAGCCTGCTGCCTCCTCCAATCCCAACCGATCCAATAACCAGATCGTCCCCTCCACGGAACCCTCCTCCAATAAGAAGCCTCCGCCTAAGAGAACCTCCACCAAGGACCGCCACACTAAGGTCGACGGACGTGGCCGTCGCATTAGAATGCCTGTCCTATGTGCCGCTCGTGTCTTCCAGCTCACCCGCGAGCTTGGCCACAAGTCTGACGGTGAAACGGTCGAGTGGCTGCTCCAGCAGGCCGAGCCAGCTGTCATCGCTGCCACCGGCACTGGAACCATCCCGGCTAACTTCACTTCGCTTAACATATCCTTGAGAAGCTCGGGATCCACTTTGTCGGTCCCGTCTCAGTTAAGATCCTCCTACTTTAATCCCAACTTCTCCATCCAAAAGCGCCGGAGTCTGTTCCCTGGAATTGGTCTGTCTTCCGATAACACCACCGCCTCTGCGCTTCTAAATTTTCAATCCAGTAACCTAACCACGAACCTGTTGCAAGCCAAGCAAGAGCTGCGCGACGGAGCTGGTCCGCCTTTGGCTGCTACGTCGTTGGATTTGTCGCCGGAAACCCCAGAAGAAGGGATGAGAAGAAAACGGCGGCCGACGGAGCAGGACTTGTCGTCAACGCAGCATCAAATGGGGAGTTATTTGTTGCAGTCAAGCGCCGGGGCGATCCCGGCTAGCCATGCTCAAATTCCGGGCAACATTTGGATGGTGACGAATTCAAGTAACCAGGTCATGAGCGGTGATCCTATATGGACATTCCCGCCGGTAAACAACGGTGGATTGTATAAGGGAAGCATGTCGAGCGCGTTGCATTTCATGAACTTCCCTACTCCTATGGCCTTATTGCCGGGTCAACAATTAGGTTCGTCGGGGATAAGTAGTGGCGGCGGCGCTGCATCAGGCGGCAACAATATTAACGAAGGACATTTGAGTATGCTGGCAGGGCTGAGCCAGTACCGGCCGGTGATCGAGCTGTCAGAGTCTCAGGCAAGTGGGTACCAATCACATCACGGTGGCGGAGGCGACGACCGGCACGACACCACTAGCCACCACTCATAG 1203 0.5544 MEGGDDLHHRPHLHRPTFPFQLLQNKEDQEAAPCSSSSPYPSLAISAEPAASSNPNRSNNQIVPSTEPSSNKKPPPKRTSTKDRHTKVDGRGRRIRMPVLCAARVFQLTRELGHKSDGETVEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTLSVPSQLRSSYFNPNFSIQKRRSLFPGIGLSSDNTTASALLNFQSSNLTTNLLQAKQELRDGAGPPLAATSLDLSPETPEEGMRRKRRPTEQDLSSTQHQMGSYLLQSSAGAIPASHAQIPGNIWMVTNSSNQVMSGDPIWTFPPVNNGGLYKGSMSSALHFMNFPTPMALLPGQQLGSSGISSGGGAASGGNNINEGHLSMLAGLSQYRPVIELSESQASGYQSHHGGGGDDRHDTTSHHS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1805 400 MobiDBLite consensus disorder prediction 377 400 - -
Lele24g1805 400 MobiDBLite consensus disorder prediction 22 75 - -
Lele24g1805 400 MobiDBLite consensus disorder prediction 1 94 - -
Lele24g1805 400 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 39 374 IPR005333 GO:0003700
Lele24g1805 400 Pfam TCP family transcription factor 79 253 IPR017887 -
Lele24g1805 400 MobiDBLite consensus disorder prediction 386 400 - -
Lele24g1805 400 MobiDBLite consensus disorder prediction 220 257 - -
Lele24g1805 400 MobiDBLite consensus disorder prediction 236 251 - -
Lele24g1805 400 ProSiteProfiles TCP domain profile. 81 135 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1805 Lele-ChrLele24 23113854 23115056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1805 72 394 TCP Transcription Factor Family AT3G47620 43.309 1.25e-62 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele24g1805 TCP 2.3e-38 No_clan