Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1803 ATGTTTCACGCCTCGCATCACATTGCACCTGTACCTGCCACCAAAGAAGGGACAGATGCTGAAGCAGCCTCTGTGCAAGCTGTTGCTCAGACATTCTGCCCTTTGAATATTGTCTTAGATAGGGAGCTGCAAACAACCTCAGATGAACTCCAATTGTCCCATGAGCTAGTTAATCGACTCAACACAGACCTCCATGGGTTCGAGGCAACGGTGTCTGAACTCTGGTATGTGGAGGAACATGATTTGCTTGCGCTTGCACTTGCACTGAACGGCAGAATGAGCGTTCGCAGATTAATAGATTCAAGAGAATCTGTGAAAAGTTCTGCTTCTGTGAAATATGGAGGAGAAGATGGGAAGTTCACGTGGGAAACTCATTGGGATTGCTTCTTCCAACCAAAACGACATGGCCTCGCCACGCGCCTGCCTGTGACAGGTCCTCTCCCGCCACACTTTCTCTCCTTCTCGCCGCCTCCTTCCTCCTCCGAACTTGTGTTGTACTGGAAGAATTGTGTAAAGGCATCCCTTGCTTTTGTTACTTCTTTTATGGGATCAGAAGCTCCCGATCTGGCAACTGAGGAAGTTAATATGTTAGAAGGAACATCAAAAACCAGTTCTTGTCCTGGTAAAAAGAACCAGGGGAAAATCCCCAAAATAATTCACAAGGCTGAAAGGGAGAAAATGAAGCGTGAGCATTTGAATGATCTCTTTCTTGATCTTGCCAATGCTATTGAACTAGGTCAGCAGCAAAACAATGGAAAGGCGTCCATATTGTGTGAAGCCACTAAGCTGCTAAGGGACCTGCTTGGCCAGATTGACACACTTAAGGAGGAGAATGTGTCCCTGCTGTCTGAATCACATTATGTCACCATGGAGAAGAATGAGCTGAAGGAGGAAACTTCTGCTCTAGAAGCACAAATCGAGAAACTTCAAGGCGAGATAGAAGCACGAGTAGCACAATCTAAACCTGACCTAAATGCGCCTCCTCCAACGGAACTTGAGCCACCAGGGCAAACAACAATTTTTCCCAGAGACTGTCTCCAACTGCCTGCTGATCCTACATTGCAACAAGGAACTGCTGTATTAGTTGTCCCCTTTCGTCCTCACCTTCAACCTTCTTTTTCCATTCCCAACATGGCCACAGCGAACTCGGTCGTGAGTAAACCTCATGCCAGATCCACCTGGAGAAATCACAGTGTAGAAATGTCTGGAGCCCAAAATTTCCTCAAGGTGCTTCTCAGCAACTTCGATATCCTTGCTGGATATGCCTCAATTAAGGCAATTGAGAGCAAGTCTCCTGTGGATGACCAGCAATGGCTTACTTACTGGATTCTCTATTCCATGGTCACCCTATTTGAGCTTACTTTTTACAAAGTTCTTGAATGGATCCCTATCTGGTCATACGCAAAGCTGATCCTAACCTGTTGGTTGGTCCTCCCCTACTTTAATGGTGCTGCCTATGTTTATGAGCATTACGTGAGACCCTTCTTCGTCAATCCTCAGACTATAATAAATATCTGGTACGTCCCAAGAAAAAAGGACTTCTTCAGTAAGCCAGATGACATTATAACTGCTGCAGAGAGGTACATTCAAGAACATGGAACAGAAGCATTTGAAAATATGATCAACAGGGCTGATAAATCAAGGAGGAGGAGTGATAGCTATACAGCCTATGATGATCACAGTTGTGGATACTGA 1695 0.4549 MFHASHHIAPVPATKEGTDAEAASVQAVAQTFCPLNIVLDRELQTTSDELQLSHELVNRLNTDLHGFEATVSELWYVEEHDLLALALALNGRMSVRRLIDSRESVKSSASVKYGGEDGKFTWETHWDCFFQPKRHGLATRLPVTGPLPPHFLSFSPPPSSSELVLYWKNCVKASLAFVTSFMGSEAPDLATEEVNMLEGTSKTSSCPGKKNQGKIPKIIHKAEREKMKREHLNDLFLDLANAIELGQQQNNGKASILCEATKLLRDLLGQIDTLKEENVSLLSESHYVTMEKNELKEETSALEAQIEKLQGEIEARVAQSKPDLNAPPPTELEPPGQTTIFPRDCLQLPADPTLQQGTAVLVVPFRPHLQPSFSIPNMATANSVVSKPHARSTWRNHSVEMSGAQNFLKVLLSNFDILAGYASIKAIESKSPVDDQQWLTYWILYSMVTLFELTFYKVLEWIPIWSYAKLILTCWLVLPYFNGAAYVYEHYVRPFFVNPQTIINIWYVPRKKDFFSKPDDIITAAERYIQEHGTEAFENMINRADKSRRRSDSYTAYDDHSCGY 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1803 564 Gene3D - 211 284 IPR036638 GO:0046983
Lele24g1803 564 CDD bHLH_AtILR3_like 221 296 - -
Lele24g1803 564 Pfam TB2/DP1, HVA22 family 420 495 IPR004345 -
Lele24g1803 564 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 216 267 IPR011598 GO:0046983
Lele24g1803 564 PANTHER TRANSCRIPTION FACTOR BHLH47 182 399 - -
Lele24g1803 564 Coils Coil 292 312 - -
Lele24g1803 564 Coils Coil 264 284 - -
Lele24g1803 564 Pfam Helix-loop-helix DNA-binding domain 220 267 IPR011598 GO:0046983
Lele24g1803 564 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 220 291 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1803 Lele-ChrLele24 23097605 23105828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1803 182 391 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 46.288 3.66e-50 171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0130 23 841601 844194 Lele24g1803 24 23097605 23105828 ECH
Lele24g1803 24 23097605 23105828 Lele24g1803 24 23097605 23105828 ECH
Lele21g1885 21 26182152 26184409 Lele24g1803 24 23097605 23105828 hybridization
Lele22g1853 22 23485829 23492380 Lele24g1803 24 23097605 23105828 hybridization