Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1800 ATGTCCGGCCGAAGAACTTCGTCAAGACTCTCAGAGAATGAGATTAATGAGATTGTTTCCAGGTTACAGGCAGTACTTCCACGACTGAACCGAAGAAACAACTCAAGGGCATCGGTATCGAAGATTGTGAAAGAAGCTTGTTGTCACGTGGAGAAGCTTCAGAAAGAGGTGGACGAGCTTAGTGAGAAACTTTCAGGGTTGATGGATTCTGTGGATATAAATGATATTGATGAACAAAGCCTTCGAAATATTCTTCAACAATGA 264 0.4205 MSGRRTSSRLSENEINEIVSRLQAVLPRLNRRNNSRASVSKIVKEACCHVEKLQKEVDELSEKLSGLMDSVDINDIDEQSLRNILQQ 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1800 87 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 69 IPR036638 GO:0046983
Lele24g1800 87 PANTHER DNA BINDING PROTEIN 1 87 IPR044172 -
Lele24g1800 87 Coils Coil 43 70 - -
Lele24g1800 87 Gene3D - 4 86 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1800 Lele-ChrLele24 23085540 23085906 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1800 7 85 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G39860 38.750 1.00e-14 61.6