Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1797 ATGAATGATATGATGCAGGAGGATCAGATGATTACAAACCAATCTGCAGCACATTCTCACAGAGGCCGAACCGTTTTCTCAAGAGCTTACCTTCCTCTTATGGGAAATTGCTTTCGACATCATCGTCACAAGGCTGATCGTACTCTCCCCTCTTCTCACCCTATTTCCGGTTCTACACAAGTTTCTAGTAGAAGCATCACCCATTCCTATGCTCATTCGGGTCCAGTGAAAGGATACAATGATAAAGCCAAACCTCAGACACTCCCTACTCCAAGATTGGAAGGTGTCATATTATCCTCCTTACATTTGAAAGCCTTCACATTCAATGATCTTAAGGATATTACTCGAAACTTTTGTCCTGACAATCTACTCGGAGAAGGGGGATTTGGTAAAGTCTACAAGGGGTGGATTGATGAACAGTCTTTTGGACCTGCAATGCCTGGTTCTGGAATGGCTGTAGCTGTAAAGAACCTTAAATCTGATGGTTTTCAAGGGCATAAGGAGTGGCTGTCTGAACTCAATTATCTTGGTCATCTTCATCATCCAAATCTTGTCAAGCTTTTCGGATTCTGCCTCGATGGGGATAGTCGGCTTCTGGTATACGAGTACATGCCCAAGGGCAGCTTGGAGGATCATCTGTTTCGCAGGGGTGCAGAACCACTTCCTTGGGCAACAAGGATCAAAGTTGCTATTGGTGCTGCTCGAGGCCTCGCCTTCCTCCATGACTCTGAACAACAAGTTATCTACCGTGACTTCAAGGCTTCTAATATCTTATTAGATTCGGAATTTAATGCAAAACTCTCAGACTTTGGTTTTGCCAAAGCAGGGCCCACCGGCGATCGTACTCATGTTTCCACTCAAGTCCTTGGTACTCGTGGCTATGCTGCTCCTGAATATATTCTCACAGGTTGGTTGACTGCAAGGTGTGATGTGTATAGCTTTGGGGTTGTGCTATTGGAACTACTATCAGGACGGCGTGCCATCGATACAACAAAATCTGGAGTTGAACAGAATCTGGTAGATTGGGCAAGACCTTATTTGGGTGACAGGAGGAAGTTATTCAGGATTATGGACAGTAAGTTAGAAGGGCAGTATCCACAGAGGGAAGCTTATACAGCTGCAATTCTTGCTTTACAGTGCATCAGAGAGGCCAAAATGAGACCCCAGATGTCTGAAGTTCTGGCTACTCTTGAACAGCTTCAACTTGCCAGAACATCCAGAGCAGACAAGAGCCCCTCCTTAAGCCCCGTGGTAGAGCGAGGTCACACTACAGAAACATCCTCTTTGAGACATAATAATCCTCATTCAACAACAGAGGGAAGGTCTATCTCCAATCACTTAGGTGAGAGCACTATGAGATCCCCTTCGGCATCTCCCAAATTACAGTCTAACAAGAGTGGATATACTCTTCCTGTGGATATCACTGCGTAG 1431 0.4528 MNDMMQEDQMITNQSAAHSHRGRTVFSRAYLPLMGNCFRHHRHKADRTLPSSHPISGSTQVSSRSITHSYAHSGPVKGYNDKAKPQTLPTPRLEGVILSSLHLKAFTFNDLKDITRNFCPDNLLGEGGFGKVYKGWIDEQSFGPAMPGSGMAVAVKNLKSDGFQGHKEWLSELNYLGHLHHPNLVKLFGFCLDGDSRLLVYEYMPKGSLEDHLFRRGAEPLPWATRIKVAIGAARGLAFLHDSEQQVIYRDFKASNILLDSEFNAKLSDFGFAKAGPTGDRTHVSTQVLGTRGYAAPEYILTGWLTARCDVYSFGVVLLELLSGRRAIDTTKSGVEQNLVDWARPYLGDRRKLFRIMDSKLEGQYPQREAYTAAILALQCIREAKMRPQMSEVLATLEQLQLARTSRADKSPSLSPVVERGHTTETSSLRHNNPHSTTEGRSISNHLGESTMRSPSASPKLQSNKSGYTLPVDITA 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1797 476 FunFam Serine/threonine-protein kinase BIK1 86 203 - -
Lele24g1797 476 ProSitePatterns Protein kinases ATP-binding region signature. 124 156 IPR017441 GO:0005524
Lele24g1797 476 SUPERFAMILY Protein kinase-like (PK-like) 91 397 IPR011009 -
Lele24g1797 476 MobiDBLite consensus disorder prediction 405 476 - -
Lele24g1797 476 MobiDBLite consensus disorder prediction 45 65 - -
Lele24g1797 476 Gene3D Phosphorylase Kinase; domain 1 93 203 - -
Lele24g1797 476 PANTHER OS01G0588500 PROTEIN-RELATED 63 401 - -
Lele24g1797 476 ProSiteProfiles Protein kinase domain profile. 118 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1797 476 Gene3D Transferase(Phosphotransferase) domain 1 204 417 - -
Lele24g1797 476 Pfam Protein tyrosine and serine/threonine kinase 122 339 IPR001245 GO:0004672|GO:0006468
Lele24g1797 476 FunFam Serine/threonine-protein kinase PBS1 204 414 - -
Lele24g1797 476 MobiDBLite consensus disorder prediction 51 65 - -
Lele24g1797 476 CDD STKc_IRAK 124 400 - -
Lele24g1797 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1797 Lele-ChrLele24 23059668 23062344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1797 64 397 Glycoside Hydrolase AT3G07070 48.844 7.46e-106 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele24g1797 PK_Tyr_Ser-Thr 4.6e-43 CL0016