Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1794 ATGGGGAAGTCACCGGGAAAATGGATAAAAACTGTTCTATTTGGGAAAAAGTCATCCAAATCAAATATTTCAAAAGCGAGAGAGAAACTTGTTAAACAGAAAGAAGCACCGATTGCTTGCAAGGCATCAGAAACGGAGTTTTCTTTTGATCCAACTCCCATTACTTTTGCTAGAAATGAGAGGGATCAAGAACTGGAAAATAAGGATCCAGAAAATCTTTTGCTTCAGAATCAAGTAGATATTGCAGGATCTGATCCTCAAGATGCCCCTTATGATCCAGAGAGAATTATGCAGGAGGAAGCTGCAACAACCGTGTGGTTTACTTTACCTCCTGATCTAGAGAAAATTAAGCAGGAGGAAGCTGCAATGGAGATGCAGGCTACTTTACCTCCTGATCTAGACATGATTAGGCAGGAGGAAGCTGCATGGAAGGTGCAAGCTACTTTCAGGGGTTATTTGGCTCGCAGGGCTTTCAGGACTCTTAAAGGCATAATAAGGTTGCAAGCACTTATCCGAGGGCGCTTGGTTAGGAGGCGAGCTATTTCTACTTTATTTTGCATGTATGGGATTATCAAGTTACAAGCACTTGTTCGTGGTCAAAGAGTTAGGCAGTCTGTTGTTGGGTATGAAATGCATGGGAAGTGCAATCTTATGAAGCCTCCGGTTGACAAGTGTGGCGACTCGGTTGGGTTAACCACAAAAATTGCAAATATGTCAGCAAATATTTTTATCCACAAGCTTCTTGCTTCATCGACTGCAACAACTGCTTTGCGTGGTCAATATGCTTATGGGGATCCGAATGCAGTCCTAAGTTGGTTGGAGTGCTGGTCGGCATCTCACTTTTGGAAACCAGTTCCCAAAGCCAAGAAAGTTCTAGACTCTAAATCTCAGAGAAAGCTGGGTAATATTTCAAATGGAGATGCTCAAATGAACAAGCCAAAACGTGGTAACTGGAAGATTCCTTCTACAAGTTCAGAGTTGGTCTTAGTGCAAGAAAATCCTGACTGTGAGAAACCGAAACGAAGCCTGAGAAAAGTTTCAAGCAAGCCCACAGTCACAGATCCAGTGCAGGAAAATTCAGAAAATGAGTTTGAGAAGGTTAAGCGTAACTTGAGAAAGGTTCATAACCCTGTTGTAGAGAATTCTGCTCAGTCAGAAGTTGAATCAGAGACTATGAAACAGCATTCAGAAAAGATAGCAGTCACCTCAGGTTATGGTCTTTCAGAAGAAAGATTCAAAAATTGTTCCAATGAGAAGATAAAAATGGATGCAACATCAGCCATGTCTGATGAGCCCAATGGAGAAGTTACACTTAGAATTTCGATTGGCAAAGCCAAGGAGGTGTCTAACATTGCCGGTACTCAAGTGCCCGTCAATTCAGTGACCTTGAGAGAGAATACAAGTAGATGTAAAAACAATTCTGGTGAAGAAGCTACCAAAGAGCTAAAGAATTCACGCGAGAGTTGTAATGATGAAAATTCTCCCCTAACAAATGGACACTTGAGTCTTAAGGAAGATTCAGCGAGAAATGAAAACCAGAAACCGGGTCAGAAATCCCCGGCTCTAGCGAAGCAGGAACTTGTAGAGGATGGTTTACAGAATAGCCCAACTCCCAGTTTACCAAGTTATATGGCGGCTACTGAATCTGCCAAGGCAAAGTTGAGAGCACAAGGGTCCCCAAGGTTGGGACAAGCTGGTGGAGGTGAGAGAAGCAACATTACCCGGCGACATTCTCTGCCATCTTCGAATAACTGTAAAATTAGTTCGCATTCACCAAGAACACTGAGACCAACTCAAGCAGGAGGCAAGGGGGGACACAGGAGTGGTGACAAAACAGTGGGTTCTTCCAGAGGTGGTAATGGAAAGTTAACTCAAGCAGAGTGGAGGAGATGCAACGCCCCAGATGAATCGTGGAAAGAATTTTATAAAATGGATGAAGATAATCTAATAAAAGTATTGAATCAGGGTAGCCATGAGCTGAGTGCAGGCAGAGTAACAAGATTATCTCTTCAGTTACAGTGCACGATACTTGGCGCGAACTTACGAAATTCCGTTGTCTCAGGCGGGGTTTCACGGTCATCAATGGCGGATTCTCCCAGGGGCTCTTCCAGCTTCTGGACTCAGGCCAACGCTCTCCTTCGCAAAAATATCACTTTCCAGAAACGAAATGTAAAGACAAATATACCGCTCATCTTATTCCCATTTTTTATCTGTGTGGTGTTTGTTATTATCCAAGCAGTAATTGATAATGAATTGGATAAGCCACAAAATAAGTGTGGTTGCATTTGTACTAAGAGAGATGGCGATAAGTGTCTGGAGGAAGCATGTGGGATTCAATACTCAGACACAGATCAAGTTGCCACTTGTCCAATTCCTGATCCTCCAGAATGGCCTCCATTGTTACAAGTGCCTGCTCCCCAATATCGAGCCGTGCGAAACGATATTATTCCATTCTTAGATTTGCCAAACGATTCTTGCAGGAGAACAGGGTCATGCCCTGTAACTTTTCTATTCACTGGCAATAATCAGTCTTTTGGAGAAACTTTGTTTGGAAATATGTTTAAAAGTCCCTTTAATGTGAATACCTCTGATATCATGGGTAGTTTGGCAAGAAATGTCCTGGGATCAGAATCAATGCCACAATCGCAAAATTTTCTTGACCCAGCTTTCTTTTCGGGTCTTCCCCTATATTATCTGCAAACTCAGTGCGCACAGAACTCTACATTTTCTGTTCCAATCCAGATATCAACCAATACCATCCAGCAAGAGACTAGATGTGCTCAAGGTTTACATTTATGGCGAAATAATTCTTCTGACGTGAACAATGAGCTATATAAAGGTTATAGAAAAGGGAACCTAGAGAGACAGATCAATGAGATAGCTGCAGCCTATGATTTTCTAAATTCAAGTAAGAATGGCTTCAATGTCATCACATGGTACAACTCAACCTATAAGAATGACACCGGTTTCCAGCAAATTGCATTGGCGCGAGTTCCCCGTTTAGTAAATTTGGTATCAAATGCCTTCCTTCAATTTCTGCAGGGTTCGGGTACTGAGATGTTATTTGATTTTGTAAAGGAAATGCCAAAACCTGAGACCCCATTGAGAATTGATGTGGCTTCTCTTCTGGGTTCCCTCTTCTTTACTTGGGTCTTCCTACTACTTTTCCCTGTATTTTTGACAGCATTGGTATATGAGAAGGAAAAGAAACTCAGAATAATGATGAAGATGCACGGTCTTGGTGATAAGCCATATTGGATGATATCCTATGCCTATTTTTTTTCCTTGTCAGTGCTCTATGTGCTATGCTTTGTGATATTTGGCTCCCTCATAGGGTTGAAATTCTTTACATTGAATGACTACAGCATCCAATTCGTTTTTTACTTCCTCTTTATAAACTTGCAAATTTCATTGGCATTTCTTGTGGCCACAATGTTTTCAAATGTTAAGACAGCTACAGTAATTGCATACATTGGTGTCTTTGCATCTGGGCTTTTAGGGGGCTTTCTTTTCAGCTTTTTTCTTGAAGACGCATCATTTCCAAGAGGGTGGATAGTTGTTTTACAGTTGTATCCTGGGTTTACGTTATATCGTGGACTCTATGAGTTAGCAGCATATGCCTTCGAAGCAAATGCTACAGGAAACGATGGAATGCGATGGGGAGATCTGAATGATAGTGAAAATGGCATGAGAGCGGTCTTAATTATCATGTTTATTGAGTGGTTTGTGGTGCTTCTTGTTGCTTATTACATTGATCAAGTATCTGGAGGTCGCAAAAGTCCTCTTTTTTTCTTGAAAAGATTTCAGAAAAAGCCTATGTCATCATTCCGGAAGCCTAGTATTCAAAGGCTGGGATCAAAAGTTTTTGTTCAGATGGAGAAACCTGATGTCATTCAAGAGAGGGAAAAGGTTGAGCAGCTGCTACTTGAACCAACTATGAATCATACAATTTTGTGTGACAACCTAAAAAAGGTGTATCCATCGAGGGACGGAAACCCAGAGAAATATGCAGTGAGAGGTTTATCTCTTGCTTTGCCTCAAGGGGAATGCTTTGGTATGCTTGGTCCCAATGGTGCTGGGAAGACCTCATTTATCAATATGATGACTGGTCTCACCAAGCCAACCTCTGGTGCAGCATTTGTTCATGGTCTGGACCTAATAACTCAAATGGATGAGATATATACTAGCATGGGCGTTTGTCCACAGCATGACTTGCTGTGGGAAACTCTAACTGGAAGAGAACACCTTCTCTTCTACGGCAGACTTAAAAATCTTAAAGGCTCGGCCTTAACACAAGCAGTGGAAGAATCTTTGAAAAGTGTAAACCTTTTCCATGGAGGAGTTGCGGATAAAAAAGCTGGAAAGTACAGTGGAGGAATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGAGATCCCAAAGTTGTTTATATGGATGAACCAAGTACTGGATTAGACCCTGCGTCAAGAAACAATTTATGGAATGTTGTCAAGCGTGCAAAGCAGAATCGGGCAATCATACTAACCACGCATTCCATGGAAGAAGCAGAGGTCTTATGTGACCGAATAGGAATATTCGTAGATGGAAGCTGGCAGTGCATAGGAAATCCAAAAGAGCTAAAAGCAAGATATGGAGGAAGCTATGTGTTCACAATGACAACATCTGTAGATCATGAGAATGAAGTGGAGAACTTGGTGCACAAGCTGTCCCCAAATGCTAGCAAGACGTACCATATCTCTGGAACTCAGAAATTTGAGCTGCCAAAACAAGAGGTCAGAATAGCAGATGTCTTCCGAGCTATTGGCATTGCAAAGAGGAACTTCACAGTGTTTGCATGGGGTTTAACAGACACCACAATGGAAGATGTCTTCATTAAGGTTTCACGTGAGGCTCAGGCACTCAACTCCTTGTCATAA 4920 0.4189 MGKSPGKWIKTVLFGKKSSKSNISKAREKLVKQKEAPIACKASETEFSFDPTPITFARNERDQELENKDPENLLLQNQVDIAGSDPQDAPYDPERIMQEEAATTVWFTLPPDLEKIKQEEAAMEMQATLPPDLDMIRQEEAAWKVQATFRGYLARRAFRTLKGIIRLQALIRGRLVRRRAISTLFCMYGIIKLQALVRGQRVRQSVVGYEMHGKCNLMKPPVDKCGDSVGLTTKIANMSANIFIHKLLASSTATTALRGQYAYGDPNAVLSWLECWSASHFWKPVPKAKKVLDSKSQRKLGNISNGDAQMNKPKRGNWKIPSTSSELVLVQENPDCEKPKRSLRKVSSKPTVTDPVQENSENEFEKVKRNLRKVHNPVVENSAQSEVESETMKQHSEKIAVTSGYGLSEERFKNCSNEKIKMDATSAMSDEPNGEVTLRISIGKAKEVSNIAGTQVPVNSVTLRENTSRCKNNSGEEATKELKNSRESCNDENSPLTNGHLSLKEDSARNENQKPGQKSPALAKQELVEDGLQNSPTPSLPSYMAATESAKAKLRAQGSPRLGQAGGGERSNITRRHSLPSSNNCKISSHSPRTLRPTQAGGKGGHRSGDKTVGSSRGGNGKLTQAEWRRCNAPDESWKEFYKMDEDNLIKVLNQGSHELSAGRVTRLSLQLQCTILGANLRNSVVSGGVSRSSMADSPRGSSSFWTQANALLRKNITFQKRNVKTNIPLILFPFFICVVFVIIQAVIDNELDKPQNKCGCICTKRDGDKCLEEACGIQYSDTDQVATCPIPDPPEWPPLLQVPAPQYRAVRNDIIPFLDLPNDSCRRTGSCPVTFLFTGNNQSFGETLFGNMFKSPFNVNTSDIMGSLARNVLGSESMPQSQNFLDPAFFSGLPLYYLQTQCAQNSTFSVPIQISTNTIQQETRCAQGLHLWRNNSSDVNNELYKGYRKGNLERQINEIAAAYDFLNSSKNGFNVITWYNSTYKNDTGFQQIALARVPRLVNLVSNAFLQFLQGSGTEMLFDFVKEMPKPETPLRIDVASLLGSLFFTWVFLLLFPVFLTALVYEKEKKLRIMMKMHGLGDKPYWMISYAYFFSLSVLYVLCFVIFGSLIGLKFFTLNDYSIQFVFYFLFINLQISLAFLVATMFSNVKTATVIAYIGVFASGLLGGFLFSFFLEDASFPRGWIVVLQLYPGFTLYRGLYELAAYAFEANATGNDGMRWGDLNDSENGMRAVLIIMFIEWFVVLLVAYYIDQVSGGRKSPLFFLKRFQKKPMSSFRKPSIQRLGSKVFVQMEKPDVIQEREKVEQLLLEPTMNHTILCDNLKKVYPSRDGNPEKYAVRGLSLALPQGECFGMLGPNGAGKTSFINMMTGLTKPTSGAAFVHGLDLITQMDEIYTSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKKAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNNLWNVVKRAKQNRAIILTTHSMEEAEVLCDRIGIFVDGSWQCIGNPKELKARYGGSYVFTMTTSVDHENEVENLVHKLSPNASKTYHISGTQKFELPKQEVRIADVFRAIGIAKRNFTVFAWGLTDTTMEDVFIKVSREAQALNSLS 1639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1794 1639 Pfam ABC transporter 1339 1483 IPR003439 GO:0005524
Lele24g1794 1639 SMART iq_5 190 207 IPR000048 GO:0005515
Lele24g1794 1639 SMART iq_5 160 181 IPR000048 GO:0005515
Lele24g1794 1639 SMART iq_5 137 159 IPR000048 GO:0005515
Lele24g1794 1639 MobiDBLite consensus disorder prediction 300 320 - -
Lele24g1794 1639 MobiDBLite consensus disorder prediction 335 364 - -
Lele24g1794 1639 MobiDBLite consensus disorder prediction 470 488 - -
Lele24g1794 1639 Pfam ABC-2 family transporter protein 919 1250 - -
Lele24g1794 1639 SMART AAA_5 1347 1530 IPR003593 -
Lele24g1794 1639 MobiDBLite consensus disorder prediction 467 521 - -
Lele24g1794 1639 ProSiteProfiles IQ motif profile. 138 166 IPR000048 GO:0005515
Lele24g1794 1639 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1317 1554 IPR003439 GO:0005524
Lele24g1794 1639 ProSitePatterns ABC transporters family signature. 1456 1470 IPR017871 GO:0005524|GO:0016887
Lele24g1794 1639 FunFam ABC transporter A family member 7 1306 1582 - -
Lele24g1794 1639 Pfam Protein of unknown function (DUF4005) 520 608 IPR025064 -
Lele24g1794 1639 MobiDBLite consensus disorder prediction 489 503 - -
Lele24g1794 1639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1316 1545 IPR027417 -
Lele24g1794 1639 MobiDBLite consensus disorder prediction 574 596 - -
Lele24g1794 1639 CDD ABC_subfamily_A 1321 1542 - -
Lele24g1794 1639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 204 IPR027417 -
Lele24g1794 1639 ProSiteProfiles IQ motif profile. 162 184 IPR000048 GO:0005515
Lele24g1794 1639 Pfam IQ calmodulin-binding motif 140 159 IPR000048 GO:0005515
Lele24g1794 1639 Pfam IQ calmodulin-binding motif 162 179 IPR000048 GO:0005515
Lele24g1794 1639 MobiDBLite consensus disorder prediction 547 627 - -
Lele24g1794 1639 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1281 1633 IPR026082 GO:0016020|GO:0055085|GO:0140359
Lele24g1794 1639 Gene3D - 1315 1597 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1794 Lele-ChrLele24 23036338 23051823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1794 1 630 IQD Protein Family AT1G74690 40.063 1.67e-100 333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0141 23 904710 909620 Lele24g1794 24 23036338 23051823 ECH
Lele24g1794 24 23036338 23051823 Lele24g1794 24 23036338 23051823 ECH
Lele21g1872 21 26113276 26116792 Lele24g1794 24 23036338 23051823 hybridization
Lele22g1842 22 23408668 23412309 Lele24g1794 24 23036338 23051823 hybridization