Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1791 ATGAGTATCGAAAAGAGGGAATTGGGGGTTGAGTTGGCAATGAGTAGAAGGATTCGAGGAAGATGGGCCTCCTCTGGTGTCCTTGGGGTTTTAGTAGACTTATGGGCTAGTTTTGATTTAGTACGACATTCTGGTTCCGCAGCGAGCATACAAACCACAGAAATGACTAAAGAAGAGCTTCAGAACCAAAATGATGACATGCTTATCGACGGATATGAACCTGAAACGCCTGGGCAAAAGCAGGAAAGTCATGTTCCTAGCGAGTTCAATCCGGATCATCTTAAAGTATTTTACGGAAAGCTATTTCCTTATGCTGATTTTTTTAAATGGATGTCTTACGGCAATGATGGGAAGCATCCTGGTTGTGACCCCTCTTACATCAGCCGGAGGGAATTTTCGTTTTCGCTTGACAACGATATATTTCTACGGTTCCAATCTTTCCACAGTGCTGTGGAGCTTGAAAACTCCATCAAAGAGAAATGCCCATTTAAGATTGATATTGGACCTGTGTATAGCGTGGAGCCCACAAAAAGGCATGCCTATACTCGGACTGGTGATAATGTCTTCGCTCCAGTTGAGAGAGAGCTAATTTTTGATATTGATATGACAGATTACGATGATGTCAGATACTGCTGCAATGGTGCTGATGTTTGCTTGAATTGCTGGCCATTGATGACTATATCTATTAAAGTGATTGATACCGCCTTAAGAGATGATTTTGGCTTTAAGCACATTCTATGGGTTTATAGTGGCCGCCGTGGTGTTCACTGTTGGGTCTGTGATGGGAAGGCAAGAAGGTTGACTAACGAGCAGAGAGCAGCTATTGCTGACTATTTTCGTGTCTACAAGGGAAATGAGAATAGTCATAAGAAGGTTTCATTGTCGGGTCATGCTCTTCATCCTTTCCTGGTGAGAGCATACACTGAAGTTCTTAAAGATTTTTTTGAGAAAGGACTACTAATAAGTCAAGCTTTACTTTCTACCGAAGAGAGATATGAGATGATCCTAGAGTTGATTCCAGACGCAGCTATTGCTTCTGAACTTAGGGGTAGATGGCAAGATAATGGGCGGTCTTCAAGTGCAAAAGAAGATATTAATGTTGTTCGATGGGAACAGCTCAAACATTTGCTGTCAAAGAATAAGGCACCAGGACTGCGAAGGTGTGTTGAAGAGATTGTGTTCTCCTATACTTACCCTAGGCTAGATATGGAGGTTTCGAAGCACATGAATCACTTGCTTAAAGCTCCATTCTGTGTACACCCAAAAACTGGCCGCGTTTGTGTCCCTATTGATCCAAATTGCTGTGAGGAGTTTGATCCTACCATAGTACCTACTCTTTCACAGCTTTTAGACGAGCTTAACGAAAGAGGTCCAAGAGATGATTTAGATGATGAATGGACAGGAACCTCACTTGAGGGTGCCGTCAGCCTTTTCAGAACGTCATTCTTACATCCCCTACTAAAAGCTTGCAAGGAGGAGATAGAAAGTTCCTATAATGCAAAATTGCAGCAGTCAAAAAACTCCTTTAGCTGGTAA 1536 0.4238 MSIEKRELGVELAMSRRIRGRWASSGVLGVLVDLWASFDLVRHSGSAASIQTTEMTKEELQNQNDDMLIDGYEPETPGQKQESHVPSEFNPDHLKVFYGKLFPYADFFKWMSYGNDGKHPGCDPSYISRREFSFSLDNDIFLRFQSFHSAVELENSIKEKCPFKIDIGPVYSVEPTKRHAYTRTGDNVFAPVERELIFDIDMTDYDDVRYCCNGADVCLNCWPLMTISIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRAAIADYFRVYKGNENSHKKVSLSGHALHPFLVRAYTEVLKDFFEKGLLISQALLSTEERYEMILELIPDAAIASELRGRWQDNGRSSSAKEDINVVRWEQLKHLLSKNKAPGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNCCEEFDPTIVPTLSQLLDELNERGPRDDLDDEWTGTSLEGAVSLFRTSFLHPLLKACKEEIESSYNAKLQQSKNSFSW 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1791 511 FunFam DNA primase 81 492 - -
Lele24g1791 511 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 95 452 IPR014052 GO:0003896|GO:0006269
Lele24g1791 511 Pfam DNA primase small subunit 198 431 IPR002755 GO:0003896|GO:0006269
Lele24g1791 511 Coils Coil 50 70 - -
Lele24g1791 511 CDD AE_Prim_S 118 440 IPR014052 GO:0003896|GO:0006269
Lele24g1791 511 Gene3D DNA primase, PRIM domain 80 492 - -
Lele24g1791 511 SUPERFAMILY Prim-pol domain 89 455 - -
Lele24g1791 511 PANTHER DNA PRIMASE SMALL SUBUNIT 81 496 IPR014052 GO:0003896|GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1791 Lele-ChrLele24 23015893 23023220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1791 55 511 Core DNA Replication Machinery Family AT5G41880 62.391 0.0 618