Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1790 ATGGAGTTTGCTTCAGGAAGATCTGGTGGTGGTGGTGGTGATGAAGATCATCGTAAAGAAGAGATTGATATAGAGGTGGAGGGGCTAGAATGTGCAAAAACGGAAATGGGAGAGGTGAGAGAAGAAAATGAAAGGCTGAAGCAGTGTTTGGACCGAGTTCTGAAGGATTACAGAACACTTGAATTGCAATTTACAGATATACTTCAAAAAGAAACCAAATCAGAATCCGCTACTTATGATGATGAATCGGATGAGCTAGTTTCTCTAAGCCTTGGAAGAGTTCATAACAATCCAGGAAACCATAATAATGATCTGAAAAGCAAAGATTTCAAACCATTATTATTGAAGAAGGATCATGAAGATGACTTGCCTCTTGGATTGGACTCCAAATTTGAAACTTCAAAGTTATCAGGAAGCCCTGCCAATATTTCTCAAGAGCCACCAAGTAAAGCTCTCAAAACAAGCAGAGATACTTCTTCTGAAGAAGACGAAGTTTCTCAACACAATCCTGAAAAGAGAGCAAGGGTTTGTGTCAGAGCAAGATGCGACGCTCCAACTGTGCAAAGATGTGCTGAGGATATGTCGGTTTTAGTTACAACTTATGAAGGAATCCACGACCACCCTCTTCCTCTCTCGGCCACCGCCATGGCTTCCACTACTTCTGCAGCAGCTTCCATGCTTTTGTCCGGTTCATCATCATCAACTTCATCCGCGACTGCCGCTTCATCAGCTGATCTCTATGGCCTGAATTTCTCCTTCTCAGATGGTTCCAGCAGATTAAAACCATTATATCTCTCCAATCCTTCATCTCTCTCATCATCATTGCCTTCTCACCCAACAATCACTCTTGACCTCACCACAAACTCAGCAGCCTCCAGATTCATGACCTCATCATCATCAAACTACAAAACAGCTCCAAGATCATCATCATCTTCATTATCATTATCATACCCTTCTTCTTCCACAAGTCTCAACTTTAGTTCCCCAACCAATCATAATTTTCTCAGCTACAACAGTAATAATAACGGGAAGGTTTTCAGCTCCATGAACCTTGCAAGGTCGACAATGGATAATATCTACAGCAGGCTGCCTTACGTGCAAAAGAACAGTGTTATCAATAACCCAACCCCTCCTCCTCCTCCTCATCCACAACCTGCTCTACCGGATAGTATCGCGGCCGCGACCAAGGCCATCGCGGCGGACCCAAAGTTTCAGTCGGCTTTGGCGGTGGCACTTAGTTCAATTATTGGCACAGGAAGCAGCCAAGGCAATCGTGGCGGCGCCGGAGAAAACTTGCCTCAGAAAATGAAATGGGGAGAGCTGTTTCCAGCATTATGA 1338 0.4417 MEFASGRSGGGGGDEDHRKEEIDIEVEGLECAKTEMGEVREENERLKQCLDRVLKDYRTLELQFTDILQKETKSESATYDDESDELVSLSLGRVHNNPGNHNNDLKSKDFKPLLLKKDHEDDLPLGLDSKFETSKLSGSPANISQEPPSKALKTSRDTSSEEDEVSQHNPEKRARVCVRARCDAPTVQRCAEDMSVLVTTYEGIHDHPLPLSATAMASTTSAAASMLLSGSSSSTSSATAASSADLYGLNFSFSDGSSRLKPLYLSNPSSLSSSLPSHPTITLDLTTNSAASRFMTSSSSNYKTAPRSSSSSLSLSYPSSSTSLNFSSPTNHNFLSYNSNNNGKVFSSMNLARSTMDNIYSRLPYVQKNSVINNPTPPPPPHPQPALPDSIAAATKAIAADPKFQSALAVALSSIIGTGSSQGNRGGAGENLPQKMKWGELFPAL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1790 445 Coils Coil 29 63 - -
Lele24g1790 445 MobiDBLite consensus disorder prediction 69 108 - -
Lele24g1790 445 MobiDBLite consensus disorder prediction 132 154 - -
Lele24g1790 445 Gene3D WRKY domain 154 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele24g1790 445 MobiDBLite consensus disorder prediction 131 173 - -
Lele24g1790 445 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 19 187 IPR044810 GO:0003700
Lele24g1790 445 MobiDBLite consensus disorder prediction 1 22 - -
Lele24g1790 445 MobiDBLite consensus disorder prediction 155 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1790 Lele-ChrLele24 23011108 23013805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1790 15 417 WRKY Transcription Factor Family AT1G18860 33.992 4.14e-40 149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0146 23 933436 936794 Lele24g1790 24 23011108 23013805 ECH
Lele24g1790 24 23011108 23013805 Lele24g1790 24 23011108 23013805 ECH
Lele21g1868 21 26091528 26094294 Lele24g1790 24 23011108 23013805 hybridization
Lele22g1838 22 23384347 23387090 Lele24g1790 24 23011108 23013805 hybridization