Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1789 ATGAGTCAGCTCTACGTTGTCCATGTGAAGACTAGCGAAGCTGTATCTCTTTCACTTCACTCTACCTTCTCCTTCGTCATAGTGCTCCTGCGATCATTAACCATGATCAGGTTGATCGTAAACCGAGGAGTTCAAGCTTCGACTTCGCGGAAGTCTCTTGCCGTTCTCAGCCTCTCACGGTCTGCTCATTCATCATTTGCAACTGTTGAAGCTGAAGAGATATCAGGTTCTAGACCTGCTGAAGTTCACAACTTGGTGCAGGGTAAATGGATAGGATCCTCGAAGTGGAACACTATTGTGGATCCTTTAAATGGAGAGCCCTTTATTAAAGTTGCTGAAGTTGATGAAACGGGCATTCAGCCTTTTATGGAAAGCTTGTCTAGCTGTCCGAAACATGGTCTGCACAATCCCTTTAAAGAACCGGAGAGATATCTTTTATATGGAGAAATATCTGCTAAGGCAGCTCACATGCTATCACTTCCAAAGGTTTCAGATTTCTTTACAAGGCTGATACAACGGGTTTCTCCAAAGAGTTATGCACAGGCACATGCAGAAGTTTACGTAACAAGGAAGTTTTTAGAGAATTTTTCTGGAGATCAGGTTCGTTTCTTGGCAAGGTCTTTTGGAGTACCTGGAAATCACCTTGGACAGCAAAGTCATGGTTTTCGCTGGCCATATGGCCCAGTGGCACTCATTACTCCTTTTAATTTTCCCTTAGAGATACCAGTCCTTCAGTTAATGGGTGCACTTTACATGGGCAACAAACCAGTCCTTAAAGTCGACAGCAAGGTGAGCATTGTCATGGACCAAATGCTACGTCTGCTTCATTGCTGTGGGTTGCCTGTTGAAGATGTTGACTTCATGAATTCTGATGGGAAGACAATGAACAAGTTATTGCTGGAGGCAAAACCTCGAATGACCCTTTTCACTGGTAGCTCAAGAGTGGCTGAAAAATTGGCTGGTGATTTAAAGGGTCGCATTAAATTGGAAGATGCTGGATTTGACTGGAAAGTACTAGGCCCTGATGTGCAAGAGGAAGAATATGTTGCCTGGGTATGTGACCAGGACGCATATGCATGTAGTGGCCAGAAGTGCTCAGCACAATCATTGTTATTCATTCACGAGAACTGGTCTAAAGATTCACTGATATCTAAGTTGAAGGATCTTGCTGAGAGAAGAAAGCTAGAAGACTTGACCATTGGTCCAGTGCTGACTGTAACAACTGAATCAATGCTAGAGCACAAGAATAACTTACTTCAGATACCAGGTTCAAAGCTGCTCTTTGGGGGCCAGCCTTTAGAGAAGCATACAATTCCTTTTATATATGGTGCTATAAAACCAACTGCCATTTATATTCCTCTTGAGGAAATCGTGAAGGAAAAAAATTATGAGCTTGTTACAAAAGAAATTTTTGGCCCTTTCCAGGTTATTACTGACTATACAAGCGATCAACTCCCAGTGGTACTAGATGCTTTGGAGAGAATGGATGCCCGTTTAACAGCTGCTGTAGTTTCAAATGATCCCCACTTTTTACAGGCAAGACATAAAAACCCTAGTTGTCTGGAAGTCATTGGCAAAACAGTAAATGGGACTACTTATGCTGGTCTAAGAGCAAGAACTACTGGAGCTCCGCAGAACCACTGGTTTGGACCTGCTGGGGATCCTAGAGGCGCAGGAATCGGAACCCCAGAGGCGATAAGGCTTGTCTGGTCTTGCCACAGAGAGATTATTTATGATGTGGGCCCCATCCTTAAGAATTGGGAAATTCCACCTTCATCTTGA 1782 0.4355 MSQLYVVHVKTSEAVSLSLHSTFSFVIVLLRSLTMIRLIVNRGVQASTSRKSLAVLSLSRSAHSSFATVEAEEISGSRPAEVHNLVQGKWIGSSKWNTIVDPLNGEPFIKVAEVDETGIQPFMESLSSCPKHGLHNPFKEPERYLLYGEISAKAAHMLSLPKVSDFFTRLIQRVSPKSYAQAHAEVYVTRKFLENFSGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVALITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMDQMLRLLHCCGLPVEDVDFMNSDGKTMNKLLLEAKPRMTLFTGSSRVAEKLAGDLKGRIKLEDAGFDWKVLGPDVQEEEYVAWVCDQDAYACSGQKCSAQSLLFIHENWSKDSLISKLKDLAERRKLEDLTIGPVLTVTTESMLEHKNNLLQIPGSKLLFGGQPLEKHTIPFIYGAIKPTAIYIPLEEIVKEKNYELVTKEIFGPFQVITDYTSDQLPVVLDALERMDARLTAAVVSNDPHFLQARHKNPSCLEVIGKTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIRLVWSCHREIIYDVGPILKNWEIPPSS 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1789 593 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 339 530 IPR016163 GO:0016620
Lele24g1789 593 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 63 592 IPR044638 GO:0004029
Lele24g1789 593 FunFam probable aldehyde dehydrogenase 75 333 - -
Lele24g1789 593 FunFam Aldehyde dehydrogenase 12 341 538 - -
Lele24g1789 593 Pfam Aldehyde dehydrogenase family 151 509 IPR015590 GO:0016491
Lele24g1789 593 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 358 369 IPR016160 GO:0016491
Lele24g1789 593 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 74 334 IPR016162 GO:0016491
Lele24g1789 593 SUPERFAMILY ALDH-like 82 518 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1789 Lele-ChrLele24 22998722 23005743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1789 35 593 Aldehyde Dehydrogenase Gene Family AT5G62530 77.699 0.0 929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1789 24 22998722 23005743 Lele24g1789 24 22998722 23005743 ECH
Lele21g1867 21 26079615 26086876 Lele24g1789 24 22998722 23005743 hybridization
Lele22g1837 22 23368373 23375187 Lele24g1789 24 22998722 23005743 hybridization