Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1779 ATGGGAAATTGCAACGCTTGTGTGAAACCAGAAGTTTCAGAAGAACCGTCGACCAACCACAAAAACCACAGGAGGAGGAAGAAATCTAAGGACAGAAGACAAAACCCGTTCGCAGAGGACGCAATTCACTCGCCGGCTCCGATCCGAGTCCTGAAGGACGTGATTCCACTGAGTCACCGAACCCGAATCAGCGACAAGTACATACTCGGACGCGAGCTGGGTCGCGGCGAGTTTGGGATCACCTACCTCTGTACCGACAGAGAAACAAAAGAAGCACTGGCCTGCAAATCGATTTCAAAACGAAAGCTACGAACGGCGGTGGATATAGAAGACGTAAGGCGCGAGGTTGCTATAATGTCAACTCTTCCTGATCACCCAAACATCGTGAAGCTCAAAGCGACCTACGAAGATAACGAGAATGTTCATCTCGTTATGGAGCTCTGTGAGGGCGGTGAGCTCTTTGACCGGATTGTCGCTAGAGGGCATTACAGTGAACGCGCCGCCGCAACGGTCGCCAGAACGATAGCAGAAGTTGTGAGGATGTGTCATGCCAACGGAGTCATGCACAGGGATCTCAAGCCTGAGAACTTCCTTTTCGCGAACAAGAAGGAGAATTCAGTCCTTAAGGCCATTGATTTTGGACTCTCTGTGTTTTTCAAACCTGAGACGGAACAGGGCGTGGCCTTGGCTATTTTGAGGGGCGTGATTGATTTTAAGAGAGAACCTTGGCCTCAGATATCTGATAGTGCGAAGAGCCTAGTGCGACAGATGTTGGAGACAGATCCTAAAAACCGGTTGACAGCTCAACAAGTTCTTGGTAAGTCGCTTGGCTTTTCTAGTATGGAAATTGAAACAGCTATTGAAATGTTTATGATTTGCAAGGAGGCTAATATATTTGTCTACTTTATCAGAAGTGATTCTGAATATTTACTGTCAATAATAACTATGGTTGCAGAACATCCATGGCTACAAAATGCGAAGAAAGCTTCGAATGTTCCATTGGGAGATATTGTGAGGACGAGGCTGAAGCAGTTCTCCATGATGAATAGATTTAAAAAGAAAGCTCTTTGGAGTGGTTATATTGAGCTAGGTGAACTACGAGACTCATTAGCAGACGAATCAGGTGAAATTGAGGCCGATGTTGTCCATGACATCATGCGTGAGGTTGACACTGACAAGGATGGGCGCATAAGCTATGAGGAGTTTGTGGCAATGATGAAAACAGGAACTGACTGGAGAAAAGCATCGAGACAGTATTCAAGAGAGAGATTCAAGAGTCTGAGTCTCAATTTGATGAAAGACGGTTCACTTCAGCTTCATGATGGAATTAGTGGTAAAGCGGTGGTGGTTTGA 1353 0.4605 MGNCNACVKPEVSEEPSTNHKNHRRRKKSKDRRQNPFAEDAIHSPAPIRVLKDVIPLSHRTRISDKYILGRELGRGEFGITYLCTDRETKEALACKSISKRKLRTAVDIEDVRREVAIMSTLPDHPNIVKLKATYEDNENVHLVMELCEGGELFDRIVARGHYSERAAATVARTIAEVVRMCHANGVMHRDLKPENFLFANKKENSVLKAIDFGLSVFFKPETEQGVALAILRGVIDFKREPWPQISDSAKSLVRQMLETDPKNRLTAQQVLGKSLGFSSMEIETAIEMFMICKEANIFVYFIRSDSEYLLSIITMVAEHPWLQNAKKASNVPLGDIVRTRLKQFSMMNRFKKKALWSGYIELGELRDSLADESGEIEADVVHDIMREVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLQLHDGISGKAVVV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1779 450 PANTHER SERINE/THREONINE-PROTEIN KINASE 222 416 - -
Lele24g1779 450 SMART serkin_6 67 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1779 450 ProSitePatterns EF-hand calcium-binding domain. 390 402 IPR018247 -
Lele24g1779 450 Gene3D Transferase(Phosphotransferase) domain 1 153 221 - -
Lele24g1779 450 CDD EFh 358 407 IPR002048 GO:0005509
Lele24g1779 450 Pfam Protein kinase domain 69 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1779 450 Gene3D Transferase(Phosphotransferase) domain 1 222 291 - -
Lele24g1779 450 SMART efh_1 381 409 IPR002048 GO:0005509
Lele24g1779 450 Gene3D - 344 445 - -
Lele24g1779 450 Gene3D Phosphorylase Kinase; domain 1 68 152 - -
Lele24g1779 450 SUPERFAMILY Protein kinase-like (PK-like) 51 273 IPR011009 -
Lele24g1779 450 ProSiteProfiles EF-hand calcium-binding domain profile. 377 412 IPR002048 GO:0005509
Lele24g1779 450 Pfam EF-hand domain pair 359 407 IPR002048 GO:0005509
Lele24g1779 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Lele24g1779 450 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Lele24g1779 450 SUPERFAMILY EF-hand 358 433 IPR011992 -
Lele24g1779 450 ProSiteProfiles Protein kinase domain profile. 67 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1779 450 FunFam Calcium-dependent protein kinase 1 69 152 - -
Lele24g1779 450 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1779 Lele-ChrLele24 22933018 22935567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1779 1 450 EF-hand Containing Proteins AT1G74740 52.545 3.46e-176 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele24g1779 Pkinase 1.4e-41 CL0016