Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1777 ATGACCCTTAAGGGTGGCACGACCCAGGCTTGTGCAGCTTGCAAATACCAGAGAAGAAAATGCACATCTGAATGTCTTCTTGCTCCATATTTCCCTGCGGACCAACCCAAGTTATTTCAGAATGTGCACAAGCTATTTGGAGTGAGCAATATTAAGAAGATGTTGAAGAAATTGGATCCTGCCCAGAAGAAAATAGCCATGGATTCAATAATCTGCCAAGCAAATATTAGGGATAAGTACCCTGTTCATGGCTGCTGGGAAGAAATTTGCAGGCTCCGTTACCAGATTTGGCGGATGGAAGAGGAGCTTCATGCTGTTCATCAGCAGCTTGAGATTTGCAGGCAACATTACCAGCAAAATCTTGATCATAATCTTCCTGAGGATAATCATGTGGCTTCTCAACTAGAGTTGGGCATCACACCTTGCTCTAATGGCCTTCAACTGTTTGATCAAATGCCTCAACCACAAGATTACAACAATATGATGGCTGAATCTTTGCCTATGTCTCAGCAGCAGCAACAACATTCTTTCTCAAATAGCAATAATGACGCTTATACTAATTCCCTTTACATTGATCCCAAGGATAGTAGTGTCCCCAATCATTTATGGGTTAACCATCCTTATGGTGATAACGATAGCAGTTCCATGGCAATGGAGTCTCAATTGGGTGCTGCCTCACAGCAGCCACTAGTCATTCAACAAGGAGAAGTTGCTGAAGATTATGATGACATGCATCCGTTTTTTGATACTATTGATGATAGACAATCATACGTTTATTCTAAGGAGGCTTATGAGTCAAGTTCTGAAGAATCGTTGAAAGATACGCCAAAGTGCACGGAGCATGTTGCTGAGAATGAATTGAAGAATGCTGCTGCATGCTTTAGTCTTACCAGTGTTAACTGA 903 0.4197 MTLKGGTTQACAACKYQRRKCTSECLLAPYFPADQPKLFQNVHKLFGVSNIKKMLKKLDPAQKKIAMDSIICQANIRDKYPVHGCWEEICRLRYQIWRMEEELHAVHQQLEICRQHYQQNLDHNLPEDNHVASQLELGITPCSNGLQLFDQMPQPQDYNNMMAESLPMSQQQQQHSFSNSNNDAYTNSLYIDPKDSSVPNHLWVNHPYGDNDSSSMAMESQLGAASQQPLVIQQGEVAEDYDDMHPFFDTIDDRQSYVYSKEAYESSSEESLKDTPKCTEHVAENELKNAAACFSLTSVN 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1777 300 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Lele24g1777 300 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Lele24g1777 300 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1777 Lele-ChrLele24 22919249 22920411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1777 1 263 AS2 family AT3G47870 39.103 5.02e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele24g1777 LOB 5.5e-34 No_clan