Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1772 ATGCCTTTGTTCCGAATCTTGAATTGTTCTGGTAGTGGTAAACGTGCCTACTGGTTCGAAGCCATGAAGACTGTTCTGTATTTGAGCTTCTCGATCTTTTGCTTGCTTCTGCTTTTGGATTGTTCGGTTCCACTTCCTCTCTGTGTTAATTCCGGAGCACCCTTTACTCTCAACACGACACTGAGCTTTTGTCCTTATAATGGAAGCACGTGCTGCAACTACACAGAAGATGCAAAACTAGCAAAGCAATTCCAAGTGATGAATATATCTAATTCTGGCTGTGCTTCCGTTTTGAAATCAATACTTTGTGCGAGGTGTGACCCGTTTTCGGCTGAGCTATTTACGGTTCAATCCTCTCCCAGATCGGTTCCCGTCCTTTGCAATTCTACCATTTCGACAAATACTACTCAGTCAAAGGCGGCAGTAGAGGACTACTGCTCCCTAGTTTGGGATACATGCCAGAATGTGTCCATAGAAAATTCTCCATTTTCTCCAACTTTGCGAGGTGGAGGAGCTACGGTAAGTACTGAAGCTGCCAAGCTCACTGAACTTTGGCAGTCCAAAACTGATTTCTGCAAAGCATTTGGTGGAGCTTCAAGTGATGCATCAGTATGTTTTGATGGTGAACCTGTTGAACTAAATAAAACTAAGACTTCCAATAGCCCTCCAGATGGCTTGTGTCTTGAGAAAATCGGCAATGGATCTTATCTCAACATGGTTGCTCATCCTGATGGTTCTAATCGCGCTTTCTTCTCTAACCAAATGGGTAAGATATGGTTGGCAACACTTCCAGCTGAGGGTTCAGGAGGGACAATGGAGCTTGATGAATCTAGCCCCTTTGTTGACCTAACCGATCGAGTCTATTTCGATTCAGCATTCGGAATGATGGGCATGGCGTTTCATCCAGACTTTGCGAAAAACGGTCGATTTTTCGCGTCATATAATTGCGATAAGTCTAAGTCACCACAATGTGCAGGAAGATGTTCGTGTAATTCGGATGTTAATTGTGATCCATCAAAGCTAGGCACTGAAAATGGTGCCCAACCATGCCAGTATCATACTGTTATAGCAGAATATACTGTTAATGGTACCGCGACCCAGCCTTCTATGACTGAAAGTGCTAAACCCATAGAGGTAAGAAGGATATTCACCATGGGTCTCCCATTTACGTCTCAACATGGAGGTCAGATACTCTTTGGACCTGATGATGGGTATTTATACTTCATGATGGGATATGGAGGTGGCAGTGGTGATCCATATAATTTTGCCCAGAACAAGAAATCATTGCTTGGAAAGATCATGAGACTTGATATTGACAACATTCCAAGTGCAGAAGAAATTGCCAAACTTGGTCTTTGGGGTAACTACTCTATTCCTAAGGATAATCCATTTGCTGAAGATGCAGATCTCCAGCCTGAAATATGGGCATTGGGATTTAGAAATCCCTGGCGCTGTAGCTTTGATTCAGAAAGATCATCCTACTTTGTGTGTGCGGATGTTGGCCAGGATCTTTTTGAGGAGGTGGATCTCGTTACGAAAGGTGGGAACTACGGGTGGCGTGTTTATGAGGGCCTTTACAAATTCACCCCAAAAGATTCACCCGGGGGCAACACTTCTTTGAACTCCATAAATCCAATATTCCCAATAGCAGGTTACAACCATTCCGAAGTAAACAAGAATGAAGGATCAGCCTCCATCACAGGCGGCTATTTCTATAGGTCTATGACTGATCCTTGCATGTATGGAAGGTACTTGTATGGAGATCTGTATGCAGTTGCTATGTGGTCGAGCATTGAGGATCCAGAAAATAGTGGAAACTTCACTACCAACAAAATCCCTTTCAGTTGTGCACGTGATTCTCCTCTCAAATGTGACTCTGTGCCTGGAAGCTCCCAGGCATCTATAGGTTACATCTTCTCGTATGGGGAAGACAACAATAAGGATGTTTATGTGCTTGCAAGCTCCGGTGTTTACCGTGTCGTTCGTCCGAGTCGATGCGGTTACACTTGCTCGAAGGAAACTGCTGCTCCAACAGGTTCTAGCCCAGAACCTTCTCCATCAAATGCAAGCCGTGGGAGTATCCTTCCTGGCAATCTGTTTCGGCAGCTTTCATATTTCCTGTTGTATCTTACGTGTTATCGTCTTCTGAACATTATGTAA 2160 0.4407 MPLFRILNCSGSGKRAYWFEAMKTVLYLSFSIFCLLLLLDCSVPLPLCVNSGAPFTLNTTLSFCPYNGSTCCNYTEDAKLAKQFQVMNISNSGCASVLKSILCARCDPFSAELFTVQSSPRSVPVLCNSTISTNTTQSKAAVEDYCSLVWDTCQNVSIENSPFSPTLRGGGATVSTEAAKLTELWQSKTDFCKAFGGASSDASVCFDGEPVELNKTKTSNSPPDGLCLEKIGNGSYLNMVAHPDGSNRAFFSNQMGKIWLATLPAEGSGGTMELDESSPFVDLTDRVYFDSAFGMMGMAFHPDFAKNGRFFASYNCDKSKSPQCAGRCSCNSDVNCDPSKLGTENGAQPCQYHTVIAEYTVNGTATQPSMTESAKPIEVRRIFTMGLPFTSQHGGQILFGPDDGYLYFMMGYGGGSGDPYNFAQNKKSLLGKIMRLDIDNIPSAEEIAKLGLWGNYSIPKDNPFAEDADLQPEIWALGFRNPWRCSFDSERSSYFVCADVGQDLFEEVDLVTKGGNYGWRVYEGLYKFTPKDSPGGNTSLNSINPIFPIAGYNHSEVNKNEGSASITGGYFYRSMTDPCMYGRYLYGDLYAVAMWSSIEDPENSGNFTTNKIPFSCARDSPLKCDSVPGSSQASIGYIFSYGEDNNKDVYVLASSGVYRVVRPSRCGYTCSKETAAPTGSSPEPSPSNASRGSILPGNLFRQLSYFLLYLTCYRLLNIM 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1772 719 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 232 571 IPR011041 -
Lele24g1772 719 FunFam HHIP-like 1 230 655 - -
Lele24g1772 719 Gene3D - 220 648 IPR011042 -
Lele24g1772 719 Pfam Glucose / Sorbosone dehydrogenase 242 529 IPR012938 -
Lele24g1772 719 PANTHER HEDGEHOG-INTERACTING PROTEIN 77 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1772 Lele-ChrLele24 22896136 22901242 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1004 17 20811792 20815073 Lele24g1772 24 22896136 22901242 CCT
Lele18g0531 18 3131485 3136356 Lele24g1772 24 22896136 22901242 CCT
Lele19g0555 19 3199480 3201549 Lele24g1772 24 22896136 22901242 CCT
Lele23g0169 23 1069444 1072858 Lele24g1772 24 22896136 22901242 ECH
Lele24g1772 24 22896136 22901242 Lele24g1772 24 22896136 22901242 ECH
Lele21g1843 21 25937817 25943704 Lele24g1772 24 22896136 22901242 hybridization
Lele22g1817 22 23249165 23252335 Lele24g1772 24 22896136 22901242 hybridization