Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1771 ATGACCATGTCCGAAGGGACTCCTCCTCCTCCTCTTGTTTCTAACGAACCCTCTAATCGATCCTCTACTGAACCCAATTCTCAAGGCCATATATCTGATTCCCCCAACGACGTCGTTCCCACTTCTAAGGAGGAAACCGCCGCCGCTCCCACCACTACCAGGAGCAACCGCCCGTCTCGCGCCTGCACCATTCGAGCTGCTTCTCGTCTCTATTCAACAACGCAGCCCGCGAACGGTGGCCGGCGACTCAAAGGTTCGAAGAAGGAGCGGCAGCTGCCGGAGGACTTGCCGGAGCAACAGCAGCAATGTAGCAGGATTGTGACACCGCTTGTGAAGCCGCCATCACCTTCGCAGTTGCCTCGGTGGAACCTGAGGTCTATGTGGGAGTTGGCTTCCGTACTCCATTTCTTGCATGTGAGCTGGAAAGCTGTGATCTTTGCTATCGAATTGCGTTGGTGGATGGTATTTAGGCCTCTTTTGAATATCTCAGCAGAGTTCTCGGCCGAAGAGTTTGAGACAGCTCTCCTTACCCCCAATGACACTTTGAGTGGTATACACATACCCTTGCTAAAGGCAATCCCTCCCATTACACGAATGGCCCTCACACGTGATACCTGGATAACTGTATTATGCAGAAAATTGAGAGATTGGTGGCAATGGGTTGCAAATGGGGAACTTCCTATTGTTGCTTCACATGGGCTAGAAATTGAGGCATACAAATCACTTGATCCCAGGATTCGTGTGGTCATCTTAAAGGCAATATGTGACATTCGTCTTGAGCAAGAAGATATTCGAAGTTATATTGACAGCTCACTCAAACATGGTGTTCAACTTCCATCATTTCATAAGGAGCATATCGGGGGTGATTCACATGGAATTTTTTATTGGTATGAAGATGACCCCATAATTGGCCATAGGTTGTATCGTGAAGTAAGGAAAACTGAAGTGATTCAAATGAGGAAAGGGAAACCAAAAGGTTCCCGGGTCAATTCTAGTACAACATGTCAGTGGGAAGCAGTTGCTACTAATTTGGATGAATTTGTAGATGTCGCCGATAAACTTTTCTCAAGCAAAAACAGGACGGAAGTGTCACTAGGGAAAAAGTTGAAGATAGACATGCTTCCTGAGATTGAGAAGGTTCATAAGAAAAAAGAGCGGTTGCTGAAAAAGCAACAAAGAGAAGCTCTTGGTCTTGATAATTTCTTGATTGTTGATGGGTTTGGTCCTGGGCGGTCACTTCGTGGTAGGAAACCTGTTACCTACACATTTGATGATTATGATCGATCCATCAATGAGGCAATTAAGATGACAAAACGAGAACAACCATCCCCAGAGCCAATAACCAGGCGAGAAGAAGGAGAAAAACCTGAAGCTTTGACCAACGGTAAATCGATTGGGCTTTCACATGCCCCTCAACATCTGAGCTTTGGCATGCCATCTCCAAATTCTCCTGATTTTGACGATGCCGAGGAAGAGCTTAAATCTGAACCAATGGATGGAAGCAATCGACGAAGACAAAGACCTATGAGGTTTTGA 1536 0.4635 MTMSEGTPPPPLVSNEPSNRSSTEPNSQGHISDSPNDVVPTSKEETAAAPTTTRSNRPSRACTIRAASRLYSTTQPANGGRRLKGSKKERQLPEDLPEQQQQCSRIVTPLVKPPSPSQLPRWNLRSMWELASVLHFLHVSWKAVIFAIELRWWMVFRPLLNISAEFSAEEFETALLTPNDTLSGIHIPLLKAIPPITRMALTRDTWITVLCRKLRDWWQWVANGELPIVASHGLEIEAYKSLDPRIRVVILKAICDIRLEQEDIRSYIDSSLKHGVQLPSFHKEHIGGDSHGIFYWYEDDPIIGHRLYREVRKTEVIQMRKGKPKGSRVNSSTTCQWEAVATNLDEFVDVADKLFSSKNRTEVSLGKKLKIDMLPEIEKVHKKKERLLKKQQREALGLDNFLIVDGFGPGRSLRGRKPVTYTFDDYDRSINEAIKMTKREQPSPEPITRREEGEKPEALTNGKSIGLSHAPQHLSFGMPSPNSPDFDDAEEELKSEPMDGSNRRRQRPMRF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1771 511 Coils Coil 374 394 - -
Lele24g1771 511 MobiDBLite consensus disorder prediction 435 458 - -
Lele24g1771 511 MobiDBLite consensus disorder prediction 435 511 - -
Lele24g1771 511 MobiDBLite consensus disorder prediction 1 101 - -
Lele24g1771 511 MobiDBLite consensus disorder prediction 495 511 - -
Lele24g1771 511 PANTHER REMODELING AND SPACING FACTOR 1 53 483 IPR028938 GO:0006355|GO:0031213
Lele24g1771 511 MobiDBLite consensus disorder prediction 16 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1771 Lele-ChrLele24 22886616 22892017 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1005 17 20815592 20817077 Lele24g1771 24 22886616 22892017 CCT
Lele19g0554 19 3195793 3197279 Lele24g1771 24 22886616 22892017 CCT
Lele24g1771 24 22886616 22892017 Lele24g1771 24 22886616 22892017 ECH
Lele21g1842 21 25929226 25934604 Lele24g1771 24 22886616 22892017 hybridization
Lele22g1815 22 23242849 23246144 Lele24g1771 24 22886616 22892017 hybridization