Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1767 ATGTCTCGATCACTCTCCGCAACCTCCACCTACGGGGATGCTTCTTCCCCCGCCTCCTCCGGCGAGATCATGTTGTTCGGCGTTAGAGTCGTCGTCGATTCCATGAGGAAGAGTGTGAGTATGAACAATCTCTCGCAGTACGAGCATCCTCAGGATGGCTCTAATAACAATAAGGACGATGTTGCTCTCGCCGCTGGTTATGCCTCCGCCGACGATGCCGTGGTTCATAATTCCGGCAAGCAGCGCGAGCGTGAGCGCAAACGAGGGGTTCCATGGACGGAGGAAGAACACAGACTGTTCTTGCTGGGATTGCAGAAGGTAGGGAAGGGCGATTGGAGAGGGATCTCAAGGAAATATGTGAAAACGAGGACTCCTACACAGGTTGCTAGCCATGCTCAGAAGTACTTCCTTCGAAAATGCAACCTTAATCGTCGACGTCGCAGATCCAGCTTATTTGACATTACTACTGTCTCGGTTTCGTCAAATCCAGTGGAAGAACAGATCCGGCCTCAAGATAATATGCCTCATTCACATCTTGTGCACCCTGCATCCTCTGAAACCGGCAACATCAATGGATTTTCAATGATGCCATTATATCCAATGGCTGTTGGGTCTGGCGCGATTTCATTCCCAGGCAGGAATCTGGTGGAGAAGCTCCCTCTGGGGCATGGAAATTATGAACACAACGGCCTAATTCCTTCTGTTTCAGATCCAAAAGTTTCTGCTAAGTCTGATGTTGCCTTGAGTTCGAGCTCATCCATTGATCTACCAACTCTTTCTCTTGGACTATCCTTGTCGTCTGATCAGAGAAATTCATCATCAAGGCACTCAAGTTTACATGCAGCGCCATGTCTCAAAAATGGAGAAAGCATCATAAGCGTTGCTTGA 888 0.4887 MSRSLSATSTYGDASSPASSGEIMLFGVRVVVDSMRKSVSMNNLSQYEHPQDGSNNNKDDVALAAGYASADDAVVHNSGKQRERERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISRKYVKTRTPTQVASHAQKYFLRKCNLNRRRRRSSLFDITTVSVSSNPVEEQIRPQDNMPHSHLVHPASSETGNINGFSMMPLYPMAVGSGAISFPGRNLVEKLPLGHGNYEHNGLIPSVSDPKVSAKSDVALSSSSSIDLPTLSLGLSLSSDQRNSSSRHSSLHAAPCLKNGESIISVA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1767 295 FunFam transcription factor MYB1R1 90 141 - -
Lele24g1767 295 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 87 139 IPR006447 GO:0003677
Lele24g1767 295 Pfam Myb-like DNA-binding domain 91 136 IPR001005 -
Lele24g1767 295 PANTHER TRANSCRIPTION FACTOR KUA1 19 236 - -
Lele24g1767 295 CDD SANT 91 136 IPR001005 -
Lele24g1767 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 140 IPR017930 -
Lele24g1767 295 ProSiteProfiles Myb-like domain profile. 84 136 IPR001005 -
Lele24g1767 295 SUPERFAMILY Homeodomain-like 86 138 IPR009057 -
Lele24g1767 295 Gene3D - 90 142 - -
Lele24g1767 295 ProSiteProfiles SANT domain profile. 87 140 IPR017884 -
Lele24g1767 295 SMART sant 88 138 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1767 Lele-ChrLele24 22838865 22840539 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele24g1767 Myb_DNA-binding 4e-11 CL0123