Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1763 ATGACTATCGCCGGCGACGTTTTCAGGCTCAATTTGCCTCAAGTTCTCGATGAATCGCCTTCTTGTTCTCAGGAACTCCATGTTCTTGCCGTCGATGACAGTCACGTCGATCGTAAGGTCATCGAGCGCTTGCTCAAAATTTCTTCCTGCAAAGCTGACTGGTTTTGGAAATCTGCAGTAACGGTTGTGGATAGTGGAACCAGCGCTTTGCAATATTTAGGATTGGATGGAGAGGAGAACTCCATTGGGTTTGATAGCGCAAAGGAGTCATCTATTTTCAGAGAGATTCCAGTGGTGATCATGTCTTCCGAGAACATTTTGACACGAATTGATAGGTGTTTGGAGGAAGGAGCAGAGGAATTTCTATTGAAGCCAGTGAAGTTATCAGATGTTAAACGAGTTACTGATTTCATCATGAGAGGTGAAAGGAAGGGGAAGGAGAAGAGATCTCAAAAGAGAAGGCGATCCGATGATCAATGTTTGTCTCCATCAACACTGCCTTTATCGAAGTCTCATCCATGTGATTCGTTATTGCCTCGACTGTCATCATTGTCACCATCTTCCTTGTCCTCCAAGAGATCAAGATTACAAGCAGATTTTGACTAG 606 0.4406 MTIAGDVFRLNLPQVLDESPSCSQELHVLAVDDSHVDRKVIERLLKISSCKADWFWKSAVTVVDSGTSALQYLGLDGEENSIGFDSAKESSIFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLSDVKRVTDFIMRGERKGKEKRSQKRRRSDDQCLSPSTLPLSKSHPCDSLLPRLSSLSPSSLSSKRSRLQADFD 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1763 201 MobiDBLite consensus disorder prediction 142 159 - -
Lele24g1763 201 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 165 IPR045279 GO:0009736
Lele24g1763 201 MobiDBLite consensus disorder prediction 142 201 - -
Lele24g1763 201 SUPERFAMILY CheY-like 25 149 IPR011006 -
Lele24g1763 201 MobiDBLite consensus disorder prediction 160 195 - -
Lele24g1763 201 ProSiteProfiles Response regulatory domain profile. 27 139 IPR001789 GO:0000160
Lele24g1763 201 Gene3D - 23 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1763 Lele-ChrLele24 22808255 22809785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1763 26 153 Response Regulator Gene Family AT5G62920 60.927 1.23e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele24g1763 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1763 24 22808255 22809785 Lele17g1009 17 20828400 20835102 CCT
Lele24g1763 24 22808255 22809785 Lele18g0528 18 3116616 3120832 CCT
Lele24g1763 24 22808255 22809785 Lele19g0549 19 3179945 3184203 CCT
Lele24g1763 24 22808255 22809785 Lele20g0901 20 15393839 15403056 CCT
Lele21g1826 21 25837962 25839513 Lele24g1763 24 22808255 22809785 hybridization
Lele22g1801 22 23149870 23151398 Lele24g1763 24 22808255 22809785 hybridization