Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1751 ATGTCGCAGAAGAGACCCCCCGAAGATGGCAAGGCTAAATCAGAGAGTAGCAGTTCGGAGGATAAGCGCAGAAAGGTTCCCGCCTTTTCCAGTGTGGTGCAAGAGGTGATCAAATTTAACTCTGTCCGGAATTTGCTGGAGCCAATTCTAGAGCCCTTGCTTCGTCGAGTGGTTAAGGAAGAAGTGGAATCTGCCCTAAAGAGGCATTTAATGAGCATGAAACAGGTCTCTGAGAAGGAGGTTCTTACTCCTGAATCAAGAAATTTGCAGCTGCAGTTTGAAAACAATATCTCTCCTCCCATCTTTACAGGGGCTCAAATTGAAGGGGAAGATGGCTCCAATTTACGGATAAGTTTAATTGATTCCCTGACAGGACGGGTTGTTAGTTCAGGACATGAATCTACAGCTAAGGTGGAAATTGTAGTACTTGAGGGTGATTTTGAAGACAGAAGTGACACTTGGATGCCTGAAGAGTTTAGGAGCAACATTGTAAAAGAGAGAGATGGAAAAAAGCCTCTTCTCATGGGAGAGGTATTTTTCTATCTTAAAGATGGAATTGGTGTAGTGGGTGAAATTTCATTTACAGATAATTCTAGCTGGACAAGGAGCCGGAAATTCAAGCTAGGAGCTAGAGTTGTAAATAACTTTGATGGATTTAGAATAAAAGAAGCAAAGACAGACTCATTTATTGTCAGGGATCACCGAGGGGAATTGTACAAGAAACACCACCCTCCTAGTCTGTCTGATGAAGTCTGGAGATTAGAAAAGATTGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCAGGAAAATATCAATACTGTAGAAGATTTTCTCGCACATCTCAACCTAGACTCAGCAAAGCTACGCAGTATACTGGGGACAGGTATGTCTGCGAAAATGTGGGAAGCAACAGTGGAGCATGCTCGAACATGTGTGCTTGATACGCGGAGATTTTTGTACTTCCCTTCTTATTCTCAACCAAAAACTCGTGTAGTCGTCAATGATGTTGCACAAGTGACGGGGCTACCCTCTGAAAGCCAGAATGTCCCTGTAGATAAGCTGTCGGAAACTGAAAAGGCTGATGCTCAAAGTTCAGTAACTTCTGCAATTCAACAAAAGGAGAAATTTGACTCTTTCAATGATGAAGCCTCTCTGATGGAGGGATGTTCACAATTAGACAATGTACTTTTCTCCTCATGCTCACCCAGATCAGATGGATTTAGTGCCAACAAGCTTTTGTCTCCTCAGAAGACTGATCGATTCGATTACTTCCAAGGGAGTGCCCCCACTCCAGATATCATGTCATCTGTGTACTCTATGGGAGCTGGTGGCTTGGATGAATATTTGTTGCCCATCAGTGACAGCATGAATTTTAGATATGACCAAACACTTGGTTTTCCAGTCCAAACTTCTAATTCTTTCATGGGTGAAGCAGATACTAGGAATCATGTCTTCGATGACCAGGCTCATCATTTCTTTGATACTCCATGTATGGATAAGCAAGCAGAAGTACCGGGTGCTGTTTATGGCAAAGCTCAGAAGAGATGGAGAATGCTATTCAATGTCCTAAAATGGCTCCTGTTGAGGAAAAAGAAGCCAGGATTGTGA 1611 0.4302 MSQKRPPEDGKAKSESSSSEDKRRKVPAFSSVVQEVIKFNSVRNLLEPILEPLLRRVVKEEVESALKRHLMSMKQVSEKEVLTPESRNLQLQFENNISPPIFTGAQIEGEDGSNLRISLIDSLTGRVVSSGHESTAKVEIVVLEGDFEDRSDTWMPEEFRSNIVKERDGKKPLLMGEVFFYLKDGIGVVGEISFTDNSSWTRSRKFKLGARVVNNFDGFRIKEAKTDSFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSQENINTVEDFLAHLNLDSAKLRSILGTGMSAKMWEATVEHARTCVLDTRRFLYFPSYSQPKTRVVVNDVAQVTGLPSESQNVPVDKLSETEKADAQSSVTSAIQQKEKFDSFNDEASLMEGCSQLDNVLFSSCSPRSDGFSANKLLSPQKTDRFDYFQGSAPTPDIMSSVYSMGAGGLDEYLLPISDSMNFRYDQTLGFPVQTSNSFMGEADTRNHVFDDQAHHFFDTPCMDKQAEVPGAVYGKAQKRWRMLFNVLKWLLLRKKKPGL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1751 536 Pfam Calmodulin binding protein C-terminal domain 321 373 IPR046829 -
Lele24g1751 536 Pfam Calmodulin binding protein central domain 246 312 IPR046830 -
Lele24g1751 536 MobiDBLite consensus disorder prediction 345 369 - -
Lele24g1751 536 Pfam Calmodulin binding protein-like N-terminal domain 89 234 IPR046831 -
Lele24g1751 536 MobiDBLite consensus disorder prediction 1 25 - -
Lele24g1751 536 PANTHER OS02G0177800 PROTEIN 3 505 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1751 Lele-ChrLele24 22718210 22722888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1751 1 361 Calmodulin-binding Proteins AT5G62570 62.604 7.76e-159 456
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1751 24 22718210 22722888 Lele24g1751 24 22718210 22722888 ECH
Lele21g1814 21 25755661 25760303 Lele24g1751 24 22718210 22722888 hybridization
Lele22g1791 22 23072911 23077584 Lele24g1751 24 22718210 22722888 hybridization