Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1743 ATGCATGGGCGTGGAGTTGAGGAGAGGAAAAGAACTCGGCACATGTGGACAAGCCCCACTCGTGGCCAACCGATTGTAAGCGCCGCTCCCTATGTTTCTTCTTCATCTTCGCCTTCCGCTAATTCATTCTATAAGGACGGTCGTAAAATTAGTGTTGGTGACTGTGCTCTCTTCAAGCCACCTCAGAAGTGTCCACCTTTTATTGGGATAATTCGTTCACTGACAGTTGGCAAAGAGGGTAAACTGAAGATACTTGTTAATTGGCTTTATCGTTCAGCTGAAGTGAACCTTGGCAAAGGTCTCCTACTGGAGACTGTGCCAAACGAAGTTTTCTACTCCTTTCATAAGGATGAGGTTCCTGCTGCATCCCTTCTGCATCCTTGTAAAGTTGCATTTCTTCCTAAAGGCGTTGAACTTCCATCAGGGACTTCGTCATTTGTGTGTAGGAGGGTTTATGACATTGCAAACAATTGTTTATGGTGGTTAACTGACCAAGATTTTATTAATGTACTTCAAGAAGAAGTAGACCAGCTATTGTATAGAACTCGTATAGCAATGCATGCTACAGTACAACCAGGTGGTCGATCTCCAAAGTCAATGAGTAGTCCAACATCATCACAGTTAAACTCAGGTTCAGATAGTGTCAAGAATGGTGCTTCTTTGCCTTCTCAAGCTAAGGGAAGGAAAAGGGAGAGGGTAGATCAAGGGCCTGAGTCTGCCAAGCGAGAACGTACAACAAAAGTTGAGGACGGAAACTCTGGTCATTCTAGACAGGAGAACATTTTAAAGGCAGAGATTGCAAAAATTACAGAAAAGGGCAGGCTTGTCAATATTGAAGGGGTTGAGAAGCTTGTGCGGCTTATGGTTCCGGATAGGAATGTGAAAAAGATAGATTTGGCAAGCAGGTCAATGCTTGCTGCTGTTATTGCAGCGACAGATAAATTGGATTGTCTTAGTCAGTTTGTGCAGCTGAAGGGTTTGCCAGTGTATGATGAATGGCTTCAAGAAGTCCATAAAGGAAAGATTGGTGATGGAAGTGGGTCTAAGGACAGTGATGAATCTGTTGAAGAATTTCTTTTGGTATTACTTCGGGCACTTGATAAGCTTCCTGTAAATCTTCAAGCTCTACAGTCATGTAACATCGGTAAATCTGTGAATCATTTGCGAACTCATAAAAACTCGGAAATCCAGAAGAAAGCTAGGGGATTAGTTGACACATGGAAGAAACGTGTTGAAGCTGAAATGAATATCAATGATGCAAAAACTGGTTCTGGTCAAACTGTCCCCTGGCCTACTAGAACACGCCTCTCTGATGTTGGTCAGGGTGGGAATAAAAATTCAGGCGGGTCATCTGATGTTGCTGTTAAGAGCTCAGTTACACAGCTTTCTGCATCCAGAACTTCCTCTGTGAAGATTACCCAGGGAGAAAATGCTGCCAGATCTGCATCTCCTGGGTCTATGAAGTCGGTGCCCTCACCAACCTCAGCAACTATAAACTCAAAAGATGGACAGGCCCGTGCTGCTGCCCTCAGTGGAGTTTCTGAGAAAAGTAGTAGTTCTAGTCAATCTCATAATAACAGTCAATCTTGTTCCAGTGACCATGCTAAAACTGGGTGTTTTTCAGGAAAGGAGGATGCTAGGAGCTCTACTGCTATGAGTGTGAATAAAATATCAGGCAGTTCTTCACGGCACCGTAAGTCTATTAATGGAATCTCAGGTGCAACTCCATCTGGAGGGCAAAGGGAGTCTGGTCGAAATTCCTCTGTGCACAAAAATTCGTCTTCTGAAAAATTGTCACAATCTGGATTAACAGAAAAGGGTCATGATGGGACTTCTCCTGAGGGAAGTACCCCCAAGTTGGTTGTTAAGATTCCAAACCGAGGTCGAAGTCCTGCAGAAAGTGCAAGTGGAGGTTCCTTTGATGATCCTTCAATAATGAACAGTCGAGCTTCATCTCCTGTTTTTTCAGAGAAGAATGATCAGTATGATCATATCTCAAAGGAAAAGATTGATTTTTATCAAGCTAATACTGGTGCAGATATTAATACTGAATCCTGGCAGAGTAATGATTTTAAAGATGTACTAACAGCATCTGATGAAGGCAACGGATCACCTGTTGCTGTTACTGATGAAGAGCGCTGCAGGACTGTTGGCAATTCTAAGAACATGGTGGAAGCATCAAAAGCTGCTTCATCATCATCTGGAAATGAACACAAGGCAGTAAATATTCAGGATGCTTCTTTCAGCTCCATAAATGCTTTGATAGATAGTTGTGTAAAGTATTCTGAAACTAATGCTTCTTTGTCTGCTGTTGATGATGTTGGAATGAAGCTTCTTGCCAGTGTAGCAGCTGGAGAGATTTCCAAATCTGAATTGACAACTCCTGCTGGATCACCTGAAATAAACACCAATGCGGTTGAACAGTCATGTCCAGGTAATGCCATGGAGTGTGAAGGAAAGCTGGTTCAAAATGAATATTATGCGAATAATGGCATTGATGAACACAAGAAGCAGGATGCTGTATCTGGGGTTTCACGTGCTAATAATGATAATGAGTCGGGTCTTTTGGCATCTGAAGTGAAGGTTCCTGAGGAGCAAAATAGGCATATTACTTCATCTAGTAAGGATTTGCAGCGTACGGAAGCCTGTCCAGAAAGCAAAGAAAAATCAAATGAAATTCCAGTTGTCGCTTCATTGGCTGACTTTCCTGAAAGCACTGTGCAAGAAGCCAGAGGTAGTGAATGTAGCAAGCAGCTTAAGGAAAACAAAAATGGTGGGAATGTTAATGCAGGTGGAGATCTTGATGTTAAAGTTAACGAGGTTGCAAGAGAAGTTGAGGTAGACACTATTGACAAAACATCACATCCCTCTGTGGAGGTTGAAGTGAAGGGTGGCAATTGTACAATTGAGGAATTAAGTAGTGGTGGACAGAAAGCCCAGAAGGTTCCTGTGGTTGCTATGCAGGATTCATTGAAAGGAACAGATGAGAATGTGCTACATCCTTTTGATGATAGTGTTGGCAAGGCTGTAGAAGACCACAGTGAAAGGGACTGCAGAATGACTGTTAATGTGGCTGCTCGAAGTCATGTGCGTCAGTCTGAAATCCAAAGAAATGAGTGTAAAAATGATGCTATGACAACACCTGAGAACAGAAGTATAGCCGGTTTAGGTTTTGGTAACACCGGTCTTGCTTCTGAGCATGTGGAGGAGAATTCAGAGACGAAAGAGGCTCAGGACCAGCATGGTGGGCATAATCTGCAGAGTGCTTCACTGAGCTTGCCTTCACAGGAAATGGAGCAGCATCCAGGCTTGAAAGAATCTAAATTGACTTACATGGAAACAGAGGAAGCTGAAGAGTGCACCTCTGCCACTGCAGACGCCTCTTCCATTTCTGCAGCTGGTGCGTCTGATGTGGTGGATGCAAAACTTGAGTTTGATTTAAATGAAGGCTTCAGTGCTGATGATGGAAAATCTGGAGAGTTGAATAGCATTCCTGTGCCTGGGTGTGCACATGCCGTACGAGTGATCAGTCCAGTGCCATTTCCTGTTTCAACCATGTCTAGTGGTATTACTGCTTCAATCACTGTGGCTGCCGCTGCAAAGGGGCCCTTTGTGCCACCTGAAGACCTGTTGAAAAGTAAAGGGCAGTTTGGCTGGAAGGGATCAGCTGCCACCAGTGCATTCCGGCCTGCCGAGCCCAGAAAAATTGTAGAAATGCCTCTTGGTACACCAGCAGCAGCTCCCATATCTGATGCCACAGCTGGAAAGCAGAGTCGACAACTATTAGATATTGATTTAAATGTGCCTGATGAAAGGATGCTTGATGATATAGCCTCTCAACCTAGTTCTCGTCAGCCAGCAGATGGTGTTTCCCCTGTTCACTGCACTGGAGGTCTTGGTCTTGACTTAAACCAAGTAGATGAAGCTTCTGATGCGGGCAATTGCTCCACTAGCAATGGTCATAAAATGGATGTACAATTTCTGCAGGTGAAACCATCATCCAATGCTCGTCCAAATAGACAGGCAAGCGCCCTAAGGGACTTCGATTTGAATGACGGACCTGCAGTTGATGAAGTCATCACGGAACCAACATTGTTCACTCACCAAGCCAGAAGCAGTTTACCAACACAGACTCCTGCATCTGGACCTAGAACGAGTAGTACTGAACTGGGGAGTTTCTCATCATGGTTTCCTTCCACTGGGAACACCTATTCAGCTGTCACAATATCCTCAATTATGCCTGATAGAGGGGATCAGCCCTTTTCAATTGTTGCCCCTAATGGGCCACAAAGAATGCTGGGTCCTGCTACTGGTGGCAGCCCATTTGGACCTGATGTTTATAGGGGACCAGTGCTGCCATCTTCTGCAATGCCATATCCATCTGTGCCATATCAGTATCCTGTCTTCCCTTTTAATTCCAGCTTTCCTCTTCCATCGTCATCATTTTCAGGCGGATCAACTACTTACGTAGATTCAGCAACTGGTGGAAGGCTTTTCTTTCCTACAGTAAATTCACAGTTAATTGGACCTGCCAGTACAGTTTCATCTCATTACACCTCCAGGCCCTATGTCTTTAGCCTTCCTGATGGTAGTGGTAACACCGATGGTAAGAAATGGAGAGGGCAGGGTTTAGACCTTAATGCTGGGCCTGGAGGTCCAGACATGGAGGGCAGAGGTGAGAGCTCAGCTCTTTTGCAAAGGCAACTTCCTGTTGCCAGTTCACAGGCCCTAGCGGAGGAGCAGGTGAGGATGTTCCAGCTGGCGGGTGGCGTTCTCAAGAGGAAGGAACCAGATGGTGGATGGGATAGCTACAAGCAATCCTCTTGGCAATAG 4833 0.4473 MHGRGVEERKRTRHMWTSPTRGQPIVSAAPYVSSSSSPSANSFYKDGRKISVGDCALFKPPQKCPPFIGIIRSLTVGKEGKLKILVNWLYRSAEVNLGKGLLLETVPNEVFYSFHKDEVPAASLLHPCKVAFLPKGVELPSGTSSFVCRRVYDIANNCLWWLTDQDFINVLQEEVDQLLYRTRIAMHATVQPGGRSPKSMSSPTSSQLNSGSDSVKNGASLPSQAKGRKRERVDQGPESAKRERTTKVEDGNSGHSRQENILKAEIAKITEKGRLVNIEGVEKLVRLMVPDRNVKKIDLASRSMLAAVIAATDKLDCLSQFVQLKGLPVYDEWLQEVHKGKIGDGSGSKDSDESVEEFLLVLLRALDKLPVNLQALQSCNIGKSVNHLRTHKNSEIQKKARGLVDTWKKRVEAEMNINDAKTGSGQTVPWPTRTRLSDVGQGGNKNSGGSSDVAVKSSVTQLSASRTSSVKITQGENAARSASPGSMKSVPSPTSATINSKDGQARAAALSGVSEKSSSSSQSHNNSQSCSSDHAKTGCFSGKEDARSSTAMSVNKISGSSSRHRKSINGISGATPSGGQRESGRNSSVHKNSSSEKLSQSGLTEKGHDGTSPEGSTPKLVVKIPNRGRSPAESASGGSFDDPSIMNSRASSPVFSEKNDQYDHISKEKIDFYQANTGADINTESWQSNDFKDVLTASDEGNGSPVAVTDEERCRTVGNSKNMVEASKAASSSSGNEHKAVNIQDASFSSINALIDSCVKYSETNASLSAVDDVGMKLLASVAAGEISKSELTTPAGSPEINTNAVEQSCPGNAMECEGKLVQNEYYANNGIDEHKKQDAVSGVSRANNDNESGLLASEVKVPEEQNRHITSSSKDLQRTEACPESKEKSNEIPVVASLADFPESTVQEARGSECSKQLKENKNGGNVNAGGDLDVKVNEVAREVEVDTIDKTSHPSVEVEVKGGNCTIEELSSGGQKAQKVPVVAMQDSLKGTDENVLHPFDDSVGKAVEDHSERDCRMTVNVAARSHVRQSEIQRNECKNDAMTTPENRSIAGLGFGNTGLASEHVEENSETKEAQDQHGGHNLQSASLSLPSQEMEQHPGLKESKLTYMETEEAEECTSATADASSISAAGASDVVDAKLEFDLNEGFSADDGKSGELNSIPVPGCAHAVRVISPVPFPVSTMSSGITASITVAAAAKGPFVPPEDLLKSKGQFGWKGSAATSAFRPAEPRKIVEMPLGTPAAAPISDATAGKQSRQLLDIDLNVPDERMLDDIASQPSSRQPADGVSPVHCTGGLGLDLNQVDEASDAGNCSTSNGHKMDVQFLQVKPSSNARPNRQASALRDFDLNDGPAVDEVITEPTLFTHQARSSLPTQTPASGPRTSSTELGSFSSWFPSTGNTYSAVTISSIMPDRGDQPFSIVAPNGPQRMLGPATGGSPFGPDVYRGPVLPSSAMPYPSVPYQYPVFPFNSSFPLPSSSFSGGSTTYVDSATGGRLFFPTVNSQLIGPASTVSSHYTSRPYVFSLPDGSGNTDGKKWRGQGLDLNAGPGGPDMEGRGESSALLQRQLPVASSQALAEEQVRMFQLAGGVLKRKEPDGGWDSYKQSSWQ 1610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1743 1610 MobiDBLite consensus disorder prediction 640 659 - -
Lele24g1743 1610 Pfam TFIIS helical bundle-like domain 362 411 IPR017923 -
Lele24g1743 1610 MobiDBLite consensus disorder prediction 194 221 - -
Lele24g1743 1610 MobiDBLite consensus disorder prediction 543 611 - -
Lele24g1743 1610 MobiDBLite consensus disorder prediction 1065 1088 - -
Lele24g1743 1610 MobiDBLite consensus disorder prediction 864 888 - -
Lele24g1743 1610 MobiDBLite consensus disorder prediction 419 504 - -
Lele24g1743 1610 MobiDBLite consensus disorder prediction 225 259 - -
Lele24g1743 1610 MobiDBLite consensus disorder prediction 190 259 - -
Lele24g1743 1610 SMART BAH_4 48 163 IPR001025 GO:0003682
Lele24g1743 1610 Pfam BAH domain 49 153 IPR001025 GO:0003682
Lele24g1743 1610 MobiDBLite consensus disorder prediction 864 891 - -
Lele24g1743 1610 CDD TFIIS_I 336 412 - -
Lele24g1743 1610 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 316 425 IPR035441 -
Lele24g1743 1610 SMART TFS2_5 334 413 IPR003617 GO:0005634
Lele24g1743 1610 MobiDBLite consensus disorder prediction 511 536 - -
Lele24g1743 1610 Gene3D - 34 277 IPR043151 -
Lele24g1743 1610 MobiDBLite consensus disorder prediction 1529 1562 - -
Lele24g1743 1610 ProSiteProfiles BAH domain profile. 48 163 IPR001025 GO:0003682
Lele24g1743 1610 MobiDBLite consensus disorder prediction 1366 1393 - -
Lele24g1743 1610 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 281 415 IPR035441 -
Lele24g1743 1610 MobiDBLite consensus disorder prediction 415 659 - -
Lele24g1743 1610 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1610 - -
Lele24g1743 1610 ProSiteProfiles TFIIS N-terminal domain profile. 335 414 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1743 Lele-ChrLele24 22668539 22674739 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lele24g1743 BAH 2.2e-08 No_clan