Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1730 ATGAATCGCAACCTCCTAGGCAATTTCTTAAGAATATGGTGTAATGGTGAGAATGAGAATCGCATTGAGGGAAGTATAGGAGAAAGGGGAAAAGAAGTAGGAAGAACTAACTCCGATCCCATGAGGAATTTTTGCTGGTCTAAACAAGTTCCGCTCAACCAGAAACTTGGGAGAAGGCTTTCGCTTGGCGAATACAAGCGAGCCTTGTCGTGGTCCAAGTATCTGATCTCCTCTGGGGCTGCAATAAAGGAAGATGGAGAAGAGGATTGGAGCGCCGACTTGTCCAGGTTGCTCATTGGCGCCAAATTTGCTATTGGCAGTCATAGTAGAATCTATAAAGGTGTTTACAAGAACACCGAAGTGGCAATTAAGTTGATAAGTCTACCGGAGGAGGACGAAGACTTGGCTTCTTTGCTTGAGAGGCAGTTTAATTCTGAGGTTGCCATGCTCTTTCGATTGCACCATCCGAATATAATCAAGTTTGTTGCTGCTTGCAAGAAATCTCCTGTCTTCTGCATAATTACTGAATATATGCCAGGAGGATCATTGAGAAGATACCTGCGTAACCAAAATCCCTATTCAATCCCACCCAAACTTGTTCTGAAATTAGCCCTAGACATTGCACGGGGTATGCAATATCTCCACTCTCAGGGGATACTTCATCGAGATCTCAAATCAGAAAACCTTCTGCTGGGAGGAGATATGCGTGTAAAAGTAGCGGACTTTGGAATCTCATGCCAAGAATCTGAGAGCTTTACTACTAATGAATTCACTGGAACATATCGTTGGATGGCCCCTGAAATGTTGACAGATAAGAATCATACCAAGAAAGCAGATGTCTACAGTTTTGGCATAGTTCTATGGGAGCTTTTAACAGCATTGACACCATATGAGAACATGACACCAGAGCAGGCAGCATTTGCAGCCTCCCAAAAGAATGTAAGGCCACCATTACCACTAGAATGTCCATTGGCATTTAGCTGTCTGGTCACCAGATGCTGGGCGGCCAATCCAAATAAACGGCCGCACTTCGATGAGATAGTTTCGATCTTGGAGGGCTATTCAGAATCCCTGAACGAGGATCCAGATTTCTTCTTTAACTTCATACCACCGCCTGCTAATACTAATATCATTAAGGAATACTTATCAGAGTGCATTTCTGGTCGTAAATCTGCTTTGTGTAATGCTTAA 1191 0.4349 MNRNLLGNFLRIWCNGENENRIEGSIGERGKEVGRTNSDPMRNFCWSKQVPLNQKLGRRLSLGEYKRALSWSKYLISSGAAIKEDGEEDWSADLSRLLIGAKFAIGSHSRIYKGVYKNTEVAIKLISLPEEDEDLASLLERQFNSEVAMLFRLHHPNIIKFVAACKKSPVFCIITEYMPGGSLRRYLRNQNPYSIPPKLVLKLALDIARGMQYLHSQGILHRDLKSENLLLGGDMRVKVADFGISCQESESFTTNEFTGTYRWMAPEMLTDKNHTKKADVYSFGIVLWELLTALTPYENMTPEQAAFAASQKNVRPPLPLECPLAFSCLVTRCWAANPNKRPHFDEIVSILEGYSESLNEDPDFFFNFIPPPANTNIIKEYLSECISGRKSALCNA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1730 396 Pfam Protein tyrosine and serine/threonine kinase 101 351 IPR001245 GO:0004672|GO:0006468
Lele24g1730 396 ProSiteProfiles Protein kinase domain profile. 97 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1730 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Lele24g1730 396 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 90 354 - -
Lele24g1730 396 PRINTS Tyrosine kinase catalytic domain signature 322 344 IPR001245 GO:0004672|GO:0006468
Lele24g1730 396 PRINTS Tyrosine kinase catalytic domain signature 259 269 IPR001245 GO:0004672|GO:0006468
Lele24g1730 396 PRINTS Tyrosine kinase catalytic domain signature 213 231 IPR001245 GO:0004672|GO:0006468
Lele24g1730 396 PRINTS Tyrosine kinase catalytic domain signature 175 188 IPR001245 GO:0004672|GO:0006468
Lele24g1730 396 PRINTS Tyrosine kinase catalytic domain signature 278 300 IPR001245 GO:0004672|GO:0006468
Lele24g1730 396 Gene3D Transferase(Phosphotransferase) domain 1 179 365 - -
Lele24g1730 396 FunFam Serine/threonine-protein kinase isoform 1 87 179 - -
Lele24g1730 396 SUPERFAMILY Protein kinase-like (PK-like) 87 351 IPR011009 -
Lele24g1730 396 CDD STKc_MAP3K-like 104 351 - -
Lele24g1730 396 SMART serkin_6 97 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1730 396 Gene3D Phosphorylase Kinase; domain 1 87 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1730 Lele-ChrLele24 22569057 22572258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1730 70 360 MAP Kinase Kinase Kinase AT1G62400 58.844 1.35e-124 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele24g1730 PK_Tyr_Ser-Thr 3.3e-64 CL0016