Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1719 ATGCAGAGCACAGCTGTCACTCTCTCCCCTTCGCTTACTCTTTACAAACCTCGCAGACCTTTTACCTCCAATCGCTTCTATTCTGCACATTTCTCTCTCTCTGCTTCCTCTTCCAAGCCCAGTGAAAGCTCCTCGTCCTCACCCTCATCCTCATCCTTGTCGTTCCATCGCCGATATTGGTCCGTTGCACCTTCTTCTTCCTCCCCCTCCTCCCCCTCTTTGAAGTTCAGGCCCTCGATATCTTTGCTTACTCCTGCTTCTTCTGATTCTGATGCAACTCGCTTTGAGGCCCGGGCCAGTTCTGTGCCTGAGAGCGCGGATGAGAGTTCCAACGCCTTATTCAAAACTCTGCAGCTCGGATCCTTGTTTGGCCTCTGGTACCTCTTCAATATATACTTTAATATCTACAATAAGCAGGTCTTGAAGGTGTACCAGTTTCCAGTAACTGTCACTGCAATTCAATTTGCTGTTGGAGCTGTCCTTGTCTTAGTCTTATGGACTTTTAATCTCCATAAAAGGCCTAAAATAAGTGGTTCCCTGCTTGCAGCTATACTGCCTTTAGCTGTGGTACATACTTTAGGGAACCTTTTCACTAACATGAGCCTTGGAAAGGTAGCCGTGTCGTTCACTCATACTATCAAAGCAATGGAGCCTTTCTTTTCAGTGGTCCTCTCTGCCATATTCCTTGGAGAGATGCCAACTGCGTTGGTGGTCGCTTCACTTTTGCCTATTGTTGGTGGAGTGGCACTGGCATCTATCACTGAGGCCTCGTTTAATTGGGCTGGATTTGGTAGTGCAATGGCATCTAATTTGACATTTCAGTCTCGTAATGTTCTTAGCAAGAAAGTCATGGTTAATAAAGAGGAAACAATGGACAATATAAACCTCTTCTCAACAATAACTGTCTTGTCCTTCTTTTTGTTAGCACCTGTGGCTATATTCAAGGAAGGCATCAAATTTACCCCTGCATACCTTCAATCTGCTGGGTTAAATGTTAAACAATTATACACCAGATCTCTTATTGCGGCACTCTGTTTCCATGCATATCAACAAGTTTCTTATATGATATTGCAGAGAGTATCACCTGTTACCCACTCTGTAGGCAACTGCGTTAAGCGGGTTGTGGTCATTGTGAGCTCTGTCCTCTTCTTCAAAACACCTGTATCGCCTGTTAACGCTTTAGATATTAAGATGCTTCCCTCATTTTCTGTTTCACTCTCTGCCATGGATCTGCAGGATACAAATTTCAGAGAAAACTGTGTCTACCAGCAGCCAATGCTTCAGTTGCAAGAGATGGAGACAAAATCCAACGTAAAAGATCTCGAGCCTCCTTCATCACAGGGTAATTTCTTGCAAGATTTACTCCCTATAGATCCATTTCAAGTATATGGGTCTTCATCAAATCCAGTTCCTGGAATCCAAACTGCAAACTTTGTTAACCCTTTTGATTGTTTCTCATTTGGCTGTTCATCAACATCAGCAGATTTTGATGTTTATGAGTCAAAACCATTCACTGAAAATATTAATGGCAATAATAAAGGGCATGCACATGTAGTTATGGAGAATAATTTCCAGTTCGGAGGTAATAAGAATTATAGCCTCAACGTCTCTCACGAGAGGAGTCAAATGGAAATGGGGGATTATGCAGGGCTGAGCAATTATTATTTGCCGTTTGATTCTCAAGAAACCAATAAGCCTATGAATTTTGTTGCACCAGACGATGAAGTCTCAATCATATCTGCAGATCATAGTTTTCTCAGAAGGGTTGGTTTGAATAATAATAAGAATAGTAGGTTATCAACTTCAGTCAGAAGGGCATGCAAAGTTCGGAACAAGTCCAACGTAGTAAAGGGACAATGGTCGGTGGAAGAAGATAGGCTGCTAGTTCAACAGGTTGAACAATACGGAGTGAGAAAGTGGTCTCATATTGCTCTGAGTTTGCCTGGGAGAATAGGCAAACAATGTCGAGAGCGTTGGCATAATCATTTAAGGCCTAACATTAAGAAGGACACATGGAGTAATGAAGAGGATAAGATACTGATCGAAGCACACGTAGAGATAGGAAATAAATGGGCAGAGATTGCTAAGAAGTTGCCTGGAAGAACTGAAAACTCCATTAAAAACCATTGGAATGCAACCAAGAGAAGGCAATATTCAAAAAGAAAGTGTCGCTCAAAGCACCCTAAACCCTCTCTTCTTCAGGATTACATCAAGAGCTTGAACTTAGACAAAAACCCTCCCCTAGATTATCGCAAAAGCAGAAGATCCTCTTGTTCTGCTAATAACCTTAATAACTACAATACAAGGAAAGCATCATCAGCAACGCCAGCAACTGAGCCGTTTTGTCCCGACAATGGCAGATTGGTTCCTACATATGACTTTAACGAGGTCCCAGACTTTTGTTTCGATGATGACAACATAACTTTGTTTCAAGAGGGGTGCAATCTTGATTCTTTGCTTGATGATATGCCTTGTGCTTCTGATGATCATACTGTGCATGGAGGAGACTTTGAAGCAAAGTCGCAATATTGTGGCGATGATGTCGTTGTTCATAATAATAATATTGATCTTGATGATGGGGATGATGATGACGATGATCAGTTTGATTCACAGAATGGGGAGGTGGAAGTTAAGAAGGAGATGGATTTGATGGAGATGATGTCTCAGATCAGAGATGTTCTTTGA 2685 0.4209 MQSTAVTLSPSLTLYKPRRPFTSNRFYSAHFSLSASSSKPSESSSSSPSSSSLSFHRRYWSVAPSSSSPSSPSLKFRPSISLLTPASSDSDATRFEARASSVPESADESSNALFKTLQLGSLFGLWYLFNIYFNIYNKQVLKVYQFPVTVTAIQFAVGAVLVLVLWTFNLHKRPKISGSLLAAILPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAIFLGEMPTALVVASLLPIVGGVALASITEASFNWAGFGSAMASNLTFQSRNVLSKKVMVNKEETMDNINLFSTITVLSFFLLAPVAIFKEGIKFTPAYLQSAGLNVKQLYTRSLIAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVLFFKTPVSPVNALDIKMLPSFSVSLSAMDLQDTNFRENCVYQQPMLQLQEMETKSNVKDLEPPSSQGNFLQDLLPIDPFQVYGSSSNPVPGIQTANFVNPFDCFSFGCSSTSADFDVYESKPFTENINGNNKGHAHVVMENNFQFGGNKNYSLNVSHERSQMEMGDYAGLSNYYLPFDSQETNKPMNFVAPDDEVSIISADHSFLRRVGLNNNKNSRLSTSVRRACKVRNKSNVVKGQWSVEEDRLLVQQVEQYGVRKWSHIALSLPGRIGKQCRERWHNHLRPNIKKDTWSNEEDKILIEAHVEIGNKWAEIAKKLPGRTENSIKNHWNATKRRQYSKRKCRSKHPKPSLLQDYIKSLNLDKNPPLDYRKSRRSSCSANNLNNYNTRKASSATPATEPFCPDNGRLVPTYDFNEVPDFCFDDDNITLFQEGCNLDSLLDDMPCASDDHTVHGGDFEAKSQYCGDDVVVHNNNIDLDDGDDDDDDQFDSQNGEVEVKKEMDLMEMMSQIRDVL 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1719 894 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 117 394 IPR004696 GO:0016020|GO:0022857|GO:0055085
Lele24g1719 894 ProSiteProfiles Myb-like domain profile. 612 663 IPR001005 -
Lele24g1719 894 MobiDBLite consensus disorder prediction 752 778 - -
Lele24g1719 894 CDD SANT 671 714 IPR001005 -
Lele24g1719 894 SUPERFAMILY Multidrug resistance efflux transporter EmrE 158 253 - -
Lele24g1719 894 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 668 718 IPR017930 -
Lele24g1719 894 ProSiteProfiles Myb-like domain profile. 664 714 IPR001005 -
Lele24g1719 894 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 612 667 IPR017930 -
Lele24g1719 894 FunFam Transcription factor MYB119 670 734 - -
Lele24g1719 894 Gene3D - 616 668 - -
Lele24g1719 894 SUPERFAMILY Homeodomain-like 614 710 IPR009057 -
Lele24g1719 894 CDD SANT 620 663 IPR001005 -
Lele24g1719 894 Gene3D - 670 722 - -
Lele24g1719 894 PANTHER SOLUTE CARRIER FAMILY 35 118 394 - -
Lele24g1719 894 SMART sant 616 665 IPR001005 -
Lele24g1719 894 SMART sant 668 716 IPR001005 -
Lele24g1719 894 MobiDBLite consensus disorder prediction 750 778 - -
Lele24g1719 894 Pfam Myb-like DNA-binding domain 620 678 - -
Lele24g1719 894 Pfam Triose-phosphate Transporter family 117 394 IPR004853 -
Lele24g1719 894 FunFam Transcriptional activator Myb isoform A 616 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1719 Lele-ChrLele24 22477912 22484963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1719 1 395 Antiporters AT5G33320 67.085 5.55e-162 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele24g1719 TPT 5e-114 CL0184