Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1708 ATGCCTGAAAATCCATGGACGACCCTCTTCTTCCTAGTAACTGCACTTTTACTTCATTCCCAATATTCTTTTATAGCTTCTTCTGCTGCTGTTAACCGACAAGGGCAAGCTCTTCTTTCATGGAAGACAACATCCCTGAACGGGTCCTTGGAGGTTCTGAGTAATTGGGACCCGATCGACGAAACTCCATGTGGTTGGTTTGGAGTTAGCTGCAACTTGAAGAACGAGGTTGTGCAATTAGATCTGAGGTATGTTGATTTGCTTGGAAGCGTTCCTTATAATTTCACCTCATTGAGTTCCTTGATCAAGCTTATCCTTATTGGAACGAACCTCACTGGTTCTATCCCAAAAGAGATAGGCTTTCTTACCAATCTCACCTACTTGGATTTGAGTGACAATTCCTTGACTGGTGAGATCCCAAGTGAGCTTTGCTTTTTGCCTCGGCTTCAAGAACTTCATCTCAACTCAAACCAGCTTGAAGGTTCGATTCCAATTGCAATTGGGAATCTCACAAAGTTGGAGTGGTTGATCTTATATGATAATCAGCTAAGTGGTGAAATTCCCACAACGATTGGAAATCTGAAGAATCTGCAAGTGATTCGAGCAGGTGGAAACAAGAACCTTGAAGGCGCTTTGCCTCAAGAAATAGGAAACTGTACAAAATTGGTCATGTTGGGTTTAGCTGAAACAAGTATCTCAGGATTTCTTCCCCCAACTCTTGGCCTCCTCAAGAAGCTGAACACTATTGCACTTTACACTTCCCTCCTCTCTGGACAGATTCCTGCTGAACTCGGTGACTGCACTGAGCTTGAGAACATTTATTTGTACGAGAATTCCCTTACTGGATCATTACCTAGCAAATTGGGAAATCTTAGGAATCTCAAGAATCTTCTTTTATGGCAGAACAGTTTAGTTGGCACCATCCCGCCAGAAATTGGAAATTGCTACCAGTTATCTGTCATTGACATCTCAATGAACTCGCTTACAGGAAGCATTCCCAAGAGTTTTGGAAATCTGACGGCTTTGGAAGAACTTCAGCTTAGCGAAAACCAGATTTCAGGGGAGATTCCTGCAGAGCTAGGGAACTGCGAGCAACTCACTCACATCGAGCTGGACAACAATCAAATCACGGGGACGATACCTTCTGAATTCGGAAACCTTAGTAATCTGACGTTGTTGTTCCTGTGGCATAACAAGCTCGAAGGAAATATACCGTCTTCACTCTCCAATTGCCAAAACCTCGAGGCTGTAGATCTGTCACAGAATGCGCTCACGGGTCCCATACCGAAGGGGATATTCGAGCTCAAGAATCTCAACAAGCTCTTACTACTTTCTAATAATCTCTCCGGAAGTATTCCATCTGAAATTGGAAATTGTTCGTCTTTGATTCGGTTCCGAGTGAGCAAAAATAAGATCACAGGGAGCATACCCCCACAGATTGGGAATCTGAGAAACTTGAACTTTTTGGATCTTGGATACAACCGGATTTCCGGAGTTATTCCGGAAGAGATGTCAGGCTGCAGGAATCTCGCGTTTTTGGACCTACATTCCAATATGATCGCCGGGAGCTTGCCGGAGAGTCTGAGTGAGCTTGTTTCGCTTCAATTTATCGACTTCTCGGATAACATGATCGAAGGTACGCTGAGCCCGAGACTAGGATCGCTTGGTTCACTCACAAAACTGATTCTCGGAAATAATCATATCTCTGGATCAATTCCTAGTCAACTCGGTTCCTGTTCGAAGCTTCAGTTGCTGGATCTTAGTAGCAACAATTTCTCCGGCAATATCCCCGGTAGTCTCGGTAATATCCCGGCGCTTGAAATTGCACTGAATCTGAGCTTGAATAAACTTGCCGGCGAGATTCCTCAGGAGTTTTCTGCCTTGGTTAAGGTGGGGATCTTAGACATTTCCCACAACGAGCTCACCGGCAACCTTCATTATCTCGCGGACCTCCAAAATCTCGTCGTCCTCAATATCTCATACAACAAATTCTCCGGGCGCATCCCGGACACGCCTTTCTTCGCAAAGCTTCCTCTAAATATGCTAGCTGGCAACCCATCGCTCTGCCTCTCCGTAAACCGATGCGCCGAAGACGATTCTGGAAGCTATTCGGGAAGTCGTCCGAAGACGGCGCGTATAGCTATGGTGGTTCTACTTTGCACTGCATGTGCTCTTCTCTTGGCGGCGCTGTACGTCGTCGTAGCGGCAAAACGACGACAGAGGGGCCACGGTAACGATCTCGACCTCGACGGGAGGGATAGCGACCTAGAGATAGGCCCCCCATGGGAGGTGACAGTGTACCAGAAGCTGGACCTGTCAATTTCTGACGTGGCGAAGTGTCTGACCGCTGGAAACGTCATCGGGCGGGGACGATCCGGGGTGGTTTACAGAGTGGACATGCCAGCAGGAATAGAAATGGCAGTGAAGAGGCTCTTGTCGTCGGAGAAATTCTCGGCGGCGGCGTTCTCGTCGGAGATAACGACACTGGGGAGAATACGACACCGTAACATCGTGAGGCTATTGGGTTGGGCGGCGAACCAGAAGACCAAGTTACTGTTTTATGATTATTTACCAAATGGTAATCTAGATACGCTTTTACACGAAGGGTGCACAGAATTGATAGAGTGGGAGACACGGTTCAAGGTGGCGCTGGGAGTGGCGGAAGGCTTAGCTTACTTGCATCATGACTGTGTGCCTGCCATCTTGCACCGGGACGTAAAAGCGCACAACATTTTGTTAGGAGACAGGTACGAGCCGTGTCTCGCAGATTTTGGTTTTGCAAGATTGGTGCACGAAGACCAAGCTTCCTTCTCCGTCAATCCACAGTTCGCTGGTTCTTTCGGCTACATTGCGCCGGAGTATGGGTGCATGTTGAAGATAACAGAGAAGAGCGACGTGTATAGCTATGGAGTGGTGCTGTTAGAGATAATAACAGGGAAACGACCGGTGGACGCGTCGTTTGGTGAGGGGCTACATGTGATAGATTGGGTGAGCGATCATCTGAAGAAGAAGAAGGACCCTGTGGAGATTGTGGATCCTAAGCTTCAAGGCCACACTGACACACACATTCAAGAGATGCTTCAAGCACTCGGCATCTCCCTCCTCTGTACCAGCACTCGTCCCGACGATCGTCCCACCATGAAAGACGTCGCCGCCTTGCTCCGTGAAATCCGCCACGACCCTCCGGCCGGCCACGACGCTCACAAGCCCAAGCCCAAGCCCACCACCACAACCAACAACAACAACTCTTCTACTTCATCCTCTGTCACTCCCACTCAGTTGTTGCTTCTCGATCATCCTTCGTCTCATTCTTCATCGCTCGCTTATTCGTCTTCTACTGTACAAGGAAGGAGTGCGTGA 3360 0.4801 MPENPWTTLFFLVTALLLHSQYSFIASSAAVNRQGQALLSWKTTSLNGSLEVLSNWDPIDETPCGWFGVSCNLKNEVVQLDLRYVDLLGSVPYNFTSLSSLIKLILIGTNLTGSIPKEIGFLTNLTYLDLSDNSLTGEIPSELCFLPRLQELHLNSNQLEGSIPIAIGNLTKLEWLILYDNQLSGEIPTTIGNLKNLQVIRAGGNKNLEGALPQEIGNCTKLVMLGLAETSISGFLPPTLGLLKKLNTIALYTSLLSGQIPAELGDCTELENIYLYENSLTGSLPSKLGNLRNLKNLLLWQNSLVGTIPPEIGNCYQLSVIDISMNSLTGSIPKSFGNLTALEELQLSENQISGEIPAELGNCEQLTHIELDNNQITGTIPSEFGNLSNLTLLFLWHNKLEGNIPSSLSNCQNLEAVDLSQNALTGPIPKGIFELKNLNKLLLLSNNLSGSIPSEIGNCSSLIRFRVSKNKITGSIPPQIGNLRNLNFLDLGYNRISGVIPEEMSGCRNLAFLDLHSNMIAGSLPESLSELVSLQFIDFSDNMIEGTLSPRLGSLGSLTKLILGNNHISGSIPSQLGSCSKLQLLDLSSNNFSGNIPGSLGNIPALEIALNLSLNKLAGEIPQEFSALVKVGILDISHNELTGNLHYLADLQNLVVLNISYNKFSGRIPDTPFFAKLPLNMLAGNPSLCLSVNRCAEDDSGSYSGSRPKTARIAMVVLLCTACALLLAALYVVVAAKRRQRGHGNDLDLDGRDSDLEIGPPWEVTVYQKLDLSISDVAKCLTAGNVIGRGRSGVVYRVDMPAGIEMAVKRLLSSEKFSAAAFSSEITTLGRIRHRNIVRLLGWAANQKTKLLFYDYLPNGNLDTLLHEGCTELIEWETRFKVALGVAEGLAYLHHDCVPAILHRDVKAHNILLGDRYEPCLADFGFARLVHEDQASFSVNPQFAGSFGYIAPEYGCMLKITEKSDVYSYGVVLLEIITGKRPVDASFGEGLHVIDWVSDHLKKKKDPVEIVDPKLQGHTDTHIQEMLQALGISLLCTSTRPDDRPTMKDVAALLREIRHDPPAGHDAHKPKPKPTTTTNNNNSSTSSSVTPTQLLLLDHPSSHSSSLAYSSSTVQGRSA 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1708 1119 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Lele24g1708 1119 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 234 334 - -
Lele24g1708 1119 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 857 1071 - -
Lele24g1708 1119 ProSitePatterns Protein kinases ATP-binding region signature. 787 809 IPR017441 GO:0005524
Lele24g1708 1119 FunFam LRR receptor-like serine/threonine-protein kinase 337 412 - -
Lele24g1708 1119 Pfam Protein kinase domain 784 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1708 1119 Gene3D Ribonuclease Inhibitor 144 222 IPR032675 -
Lele24g1708 1119 SMART LRR_typ_2 291 315 IPR003591 -
Lele24g1708 1119 SMART LRR_typ_2 651 684 IPR003591 -
Lele24g1708 1119 SMART LRR_typ_2 435 459 IPR003591 -
Lele24g1708 1119 SMART LRR_typ_2 387 411 IPR003591 -
Lele24g1708 1119 SMART LRR_typ_2 339 363 IPR003591 -
Lele24g1708 1119 SMART LRR_typ_2 170 194 IPR003591 -
Lele24g1708 1119 SMART LRR_typ_2 555 579 IPR003591 -
Lele24g1708 1119 SMART LRR_typ_2 122 144 IPR003591 -
Lele24g1708 1119 SMART LRR_typ_2 483 507 IPR003591 -
Lele24g1708 1119 SMART LRR_typ_2 146 169 IPR003591 -
Lele24g1708 1119 Gene3D Ribonuclease Inhibitor 223 330 IPR032675 -
Lele24g1708 1119 Gene3D Phosphorylase Kinase; domain 1 765 856 - -
Lele24g1708 1119 Gene3D Transferase(Phosphotransferase) domain 1 857 1073 - -
Lele24g1708 1119 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 413 699 - -
Lele24g1708 1119 Pfam Leucine rich repeat 317 376 IPR001611 GO:0005515
Lele24g1708 1119 Pfam Leucine rich repeat 147 206 IPR001611 GO:0005515
Lele24g1708 1119 Pfam Leucine rich repeat 464 520 IPR001611 GO:0005515
Lele24g1708 1119 MobiDBLite consensus disorder prediction 1059 1119 - -
Lele24g1708 1119 SMART serkin_6 781 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1708 1119 ProSiteProfiles Protein kinase domain profile. 781 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1708 1119 Gene3D Ribonuclease Inhibitor 33 143 IPR032675 -
Lele24g1708 1119 SUPERFAMILY RNI-like 272 646 - -
Lele24g1708 1119 MobiDBLite consensus disorder prediction 1073 1119 - -
Lele24g1708 1119 Gene3D Ribonuclease Inhibitor 430 523 IPR032675 -
Lele24g1708 1119 ProSiteProfiles Leucine-rich repeat profile. 124 147 IPR001611 GO:0005515
Lele24g1708 1119 Pfam Leucine Rich Repeat 124 146 IPR001611 GO:0005515
Lele24g1708 1119 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 31 205 - -
Lele24g1708 1119 Gene3D Ribonuclease Inhibitor 609 696 IPR032675 -
Lele24g1708 1119 Gene3D Ribonuclease Inhibitor 331 429 IPR032675 -
Lele24g1708 1119 Gene3D Ribonuclease Inhibitor 524 608 IPR032675 -
Lele24g1708 1119 ProSitePatterns Serine/Threonine protein kinases active-site signature. 901 913 IPR008271 GO:0004672|GO:0006468
Lele24g1708 1119 FunFam Putative LRR receptor-like serine/threonine-protein kinase 766 856 - -
Lele24g1708 1119 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 444 1055 - -
Lele24g1708 1119 SMART LRR_sd22_2 122 154 - -
Lele24g1708 1119 SMART LRR_sd22_2 628 653 - -
Lele24g1708 1119 SMART LRR_sd22_2 267 293 - -
Lele24g1708 1119 SMART LRR_sd22_2 531 546 - -
Lele24g1708 1119 SMART LRR_sd22_2 170 196 - -
Lele24g1708 1119 SMART LRR_sd22_2 483 506 - -
Lele24g1708 1119 SMART LRR_sd22_2 387 416 - -
Lele24g1708 1119 SUPERFAMILY L domain-like 34 305 - -
Lele24g1708 1119 SUPERFAMILY Protein kinase-like (PK-like) 770 1056 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1708 Lele-ChrLele24 22403180 22407388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1708 30 1074 Receptor kinase-like Gene Family AT5G56040 54.143 0.0 1103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele24g1708 Pkinase 2.5e-40 CL0016