Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1699 ATGGATTCGACGTCGTCATTAAGCTCTTACAATTCACCATGTGCTGCCTGCAAATTCTTGAGGAGAAAATGCTTGCCAGGTTGCATCTTCGCGCCTTATTTTCCCCCGGAAGAGCCACAGAAATTCGCCAACGTCCACAAGATATTCGGAGCCAGTAACGTCACTAAGCTTCTCAACGAGCTCCTTCCTCACCAGCGAGAAGACGCCGTGAACTCACTAGCCTACGAAGCGGAGGCTCGCGTCAGAGACCCCGTCTACGGCTGCGTCGGCGCCATCTCCTTCCTCCAGAGACAGGTCCAGAGGCTTCAGAAGGAGCTTGACGCTGCTAACGCCGATCTGCTCCGTTATGCCTGCAACGACATAGCGCCGTCGTCGTCACAGCCTGGATTGTCCTCTTCAGTTCAAGCCTGTGTTGTGCTTCAACGACAAAGCCCTATGGATTTTGGTGATGGTGCTTATTCTCTTCCTTGGGCTGATTCTTCTTCGGAGGACATCAATAATGGAGGAGGAGTTATGGACTCTAGCCGCTGGAGCCTTATTACTTGGACTCTTGCTCATTCATCTACGTGA 570 0.5211 MDSTSSLSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYACNDIAPSSSQPGLSSSVQACVVLQRQSPMDFGDGAYSLPWADSSSEDINNGGGVMDSSRWSLITWTLAHSST 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1699 189 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Lele24g1699 189 Coils Coil 92 119 - -
Lele24g1699 189 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Lele24g1699 189 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1699 Lele-ChrLele24 22328891 22329556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1699 5 117 AS2 family AT5G63090 92.035 3.78e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele24g1699 LOB 5.6e-42 No_clan