Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1695 ATGGGTCGTCATTCCTGTTGTGTAAAGGAAAAACTGAGAAAGGGCCTGTGGTCCCCTGAAGAAGATGAGAAGCTCTTTGATTACATTACCAGATATGGCGTTGGCTGCTGGAGTTCTGTTCCCAAACTCGCCGGGTTGCAAAGATGTGGAAAGAGTTGCAGATTGAGATGGATTAATTATCTGAGGCCCGATTTGAAGAGAGGCATGTTTTCTCAACAAGAAGAAGATCTCATCATCAGCCTTCATGAAGTTCTTGGCAATAGGTGGGCTCAGATTGCGGCACAGTTACCAGGAAGAACAGATAATGAGATAAAGAACTTCTGGAATTCAAGTTTGAAGAAGAAGCTGCTGAAGCAAGGGATTGATCCAACCACACACAAGCCTCTAATTATCAAGGAACCTTCTCATCATCAATCATCAATAAAGGAGGAGAAGAAAAGTCTCACATCAAATTCATCTCTGCAGATTCCATTCTCATCAGTGATCTCAGCTCCAACAACAACATCCTTAGGCTTCTCATCATCATCATCACTTGCAGGAAGCGATAATTCCAATCAGTTTGAGAATAATATTAATGGTTATGATCCATTGGCCTTCTTTGAGTTTCAAATGGCGGGTTTGAACCAATCTGGGTTCGGATTCAACATGTCCTCCATAATGCCAGGTCTGATCAGTGCAAATTCCATGACGGAGTTATCCTCGGAAAAAAATTCGGGTTCGAGAATCAGTTCAAGCAATAGCTTGAGCAGCTATGTCCAAGGAGGAGGGTGTCAACAGATAAGTAACAGTAGTTTAATGGTGGATCCATTATTGTATGATCAGTTTCAAGCAGTGAATGGTAATACAAAGAACGAAGAAGGTGATTATCAGACGTTGATGAAGACGACGATGTCGTCGTTGTGGGAAGAAGATGGTGGTGGGCAGATTCTGAATCAAAGCTCCATAGATTTCAACGCCACCTATCCGTTAAAGTCACTATCAGAAGATCTAACGCCCGTGAATTTTGATGCTTTCCACCATATGTAA 1026 0.422 MGRHSCCVKEKLRKGLWSPEEDEKLFDYITRYGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSSLKKKLLKQGIDPTTHKPLIIKEPSHHQSSIKEEKKSLTSNSSLQIPFSSVISAPTTTSLGFSSSSSLAGSDNSNQFENNINGYDPLAFFEFQMAGLNQSGFGFNMSSIMPGLISANSMTELSSEKNSGSRISSSNSLSSYVQGGGCQQISNSSLMVDPLLYDQFQAVNGNTKNEEGDYQTLMKTTMSSLWEEDGGGQILNQSSIDFNATYPLKSLSEDLTPVNFDAFHHM 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1695 341 Gene3D - 11 67 - -
Lele24g1695 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lele24g1695 341 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele24g1695 341 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Lele24g1695 341 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele24g1695 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Lele24g1695 341 CDD SANT 70 112 IPR001005 -
Lele24g1695 341 FunFam Transcription factor MYB86 69 137 - -
Lele24g1695 341 CDD SANT 17 61 IPR001005 -
Lele24g1695 341 MobiDBLite consensus disorder prediction 127 146 - -
Lele24g1695 341 MobiDBLite consensus disorder prediction 129 144 - -
Lele24g1695 341 FunFam MYB transcription factor 11 67 - -
Lele24g1695 341 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele24g1695 341 SMART sant 13 63 IPR001005 -
Lele24g1695 341 SMART sant 66 114 IPR001005 -
Lele24g1695 341 Gene3D - 69 151 - -
Lele24g1695 341 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele24g1695 341 PANTHER MYB DOMAIN PROTEIN 55 1 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1695 Lele-ChrLele24 22299834 22301035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1695 1 190 MYB Transcription Factor Family AT1G57560 58.852 6.49e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele24g1695 Myb_DNA-binding 2.7e-14 CL0123